Merge pull request #45 from DataBiosphere/qi-publish #202
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| # This is workflow designed to test all supported apps in parallel | |
| name: App Smoke Test | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the main branch | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "test" | |
| test: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| strategy: | |
| # means we do not want a failure in a single app's smoketest to cause others to fail. Can be changed | |
| fail-fast: false | |
| # add new apps to be smoke tested to the array below | |
| matrix: | |
| app: [jupyter, ucsc-genome-browser, rstudio, cellxgene, cirrocumulus] | |
| env: | |
| APP_NAME: ${{ matrix.app }} | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out repo under $GITHUB_WORKSPACE, so your job can access it | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Setup data for tests and perform system installs | |
| run: | | |
| sudo apt-get install jq | |
| curl https://raw.githubusercontent.com/helm/helm/master/scripts/get-helm-3 | bash | |
| sudo wget https://github.com/mikefarah/yq/releases/download/v4.28.1/yq_linux_amd64 -O /usr/bin/yq | |
| sudo chmod +x /usr/bin/yq | |
| # Note the `--driver=none`. It means that minikube will run on the existing vm ('bare metal') provided by github actions instead of a nested vm | |
| # This is required as github actions does not support nested virtualization. See: https://github.com/actions/virtual-environments/issues/183https://github.com/actions/virtual-environments/issues/183 | |
| # Unfortunately, this makes the smoke tests themselves incompatible with running locally, as mac does not support `--driver=none`, and it changes the mount syntax | |
| # As such, the pod mount directory (specified in app.yaml) is sourced directly from the github actions file system. Hence the `sudo cp ...` line | |
| - name: Minikube install and start | |
| run : | | |
| sudo apt-get install conntrack | |
| curl -LO https://storage.googleapis.com/minikube/releases/latest/minikube-linux-amd64 | |
| sudo install minikube-linux-amd64 /usr/bin/minikube | |
| sudo chmod +x /usr/bin/minikube | |
| minikube start --no-vtx-check --driver=none --vm=true --kubernetes-version=v1.21.0 | |
| sudo mkdir -p /data | |
| sudo cp ./test/* /data | |
| - name: Run smoke test on app | |
| run: | | |
| sudo echo "$(minikube ip) $(jq -r .hostname < ci-config.json)" | sudo tee -a /etc/hosts | |
| ./test/smoke-test.sh $APP_NAME |