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EVA-3641 Specify the analysis only option correctly #219

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merged 4 commits into from
Sep 9, 2024

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@tcezard tcezard commented Aug 27, 2024

And other improvement to the error reporting

@@ -226,7 +226,7 @@ def load_from_ena_from_project_or_analysis(self, analysis_accession=None):
command = (f"perl {cfg['executable']['load_from_ena']} -p {self.project_accession} -c submitted -v 1 "
f"-l {self._get_dir('scratch')} -e {str(self.eload_num)}")
if analysis_accession:
command += f' -A -a {analysis_accession}'
command += f' -A 1 -a {analysis_accession}'
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This is an error that was compensated by another in metadata

eva_submission/eload_brokering.py Outdated Show resolved Hide resolved
Co-authored-by: April Shen <april.tuesday@gmail.com>
@tcezard tcezard merged commit 9378f65 into EBIvariation:master Sep 9, 2024
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3 participants