updating to v1.3.0: Unable to automatically install 'OpenSpecFun' #527

ghost · 2019-11-27T16:05:16Z

I having difficulties in updating packages to v1.3.0 and @fredrikekre suggested I file an issue here. Here's the beginning of the stack trace:

  Updating registry at `~/.julia/registries/General`
  Updating git-repo `https://github.com/JuliaRegistries/General.git`
 Resolving package versions...
 Installed Plots ─ v0.28.0
┌ Error: Tree Hash Mismatch!
│   Expected git-tree-sha1:   d322d52dbe634d659d67312eea8a78c16112127e
│   Calculated git-tree-sha1: 0aee4fdfd24ee5162c06e2507d82c11a8f6a9ad2
└ @ Pkg.Artifacts /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:724
ERROR: Unable to automatically install 'OpenSpecFun' from '/home/healyp/.julia/packages/OpenSpecFun_jll/XrUb6/Artifacts.toml'
Stacktrace:
 [1] error(::String) at ./error.jl:33

On suggestion of @giordano, versinoinfo() gives

julia> versioninfo()
Julia Version 1.3.0
Commit 46ce4d7933 (2019-11-26 06:09 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
  CPU: Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-6.0.1 (ORCJIT, sandybridge)
Environment:
  JULIAPATH = .:/home/healyp/src/julia-1.3.0/bin/
  JULIA_PKGDIR = /home/healyp/.julia/
  JULIA_NUM_THREADS = 8

All suggestions appreciated.

Many thanks.

The text was updated successfully, but these errors were encountered:

giordano · 2019-11-27T16:09:22Z

What's the output of

using Pkg.BinaryPlatforms
platform_key_abi()

I think I have your same platform and the hash is correct for me. Maybe a corrupted download? But that would have had a mismatch in the hash of the tarball

fredrikekre · 2019-11-27T16:19:21Z

Might be possible that the hash is wrong in the Artifacts file.

giordano · 2019-11-27T16:20:40Z

Might be possible that the hash is wrong in the Artifacts file.

I assume I'd have had the same error installing SpecialFunctions.jl in an empty environment, no?

fredrikekre · 2019-11-27T16:21:29Z

Thats true, maybe we just compute it wrong? But I assume the same function is used when creating the artifacts file as when unpacking the tarball.

ghost · 2019-11-27T16:49:24Z

julia> platform_key_abi()
Linux(:x86_64, libc=:glibc, compiler_abi=CompilerABI(libgfortran_version=v"4.0.0", cxxstring_abi=:cxx11))

giordano · 2019-11-27T16:52:58Z

No, ok, your platform is x86_64-linux-gnu-libgfortran4, I have libgfortran5 instead of 4. There is then the possibility that the hash is wrong in Artifacts.toml

ghost · 2019-11-27T17:02:59Z

Might be possible that the hash is wrong in the Artifacts file.

I assume I'd have had the same error installing SpecialFunctions.jl in an empty environment, no?

I should say that this same difficulty comes up in both cases, both upgrading from v1.1.1 and doing a first-time install on another machine.

Thanks,
PH

fredrikekre · 2019-11-27T20:33:58Z

On my machine all the hashes look correct;

using Pkg
Pkg.PlatformEngines.probe_platform_engines!()

toml = read(`curl -sL https://raw.githubusercontent.com/JuliaBinaryWrappers/OpenSpecFun_jll.jl/master/Artifacts.toml`);
artifacts = Pkg.TOML.parse(IOBuffer(toml))
for a in artifacts["OpenSpecFun"]
    for dl in a["download"]
        dir = mktempdir()
        @assert Pkg.PlatformEngines.download_verify_unpack(dl["url"], dl["sha256"], dir; ignore_existence=true, verbose=true)
        treehash = bytes2hex(Pkg.GitTools.tree_hash(dir))
        treehash == a["git-tree-sha1"] || error("hash mismatch!")
    end
end

passes. Does that error for you?

PhilipLoewen · 2019-11-28T05:22:32Z

I see the same error message, with the same expected and calculated hash values, as the OP.

Running the code suggested by @fredrikekre above produces an interesting result:

           for dl in a["download"]
               dir = mktempdir()
               @assert Pkg.PlatformEngines.download_verify_unpack(dl["url"], dl["sha256"], dir; ignore_existence=true, verbose=true)
               treehash = bytes2hex(Pkg.GitTools.tree_hash(dir))
               treehash == a["git-tree-sha1"] || error("hash mismatch!")
           end
       end
[ Info: Downloading https://github.com/JuliaBinaryWrappers/OpenSpecFun_jll.jl/releases/download/OpenSpecFun-v0.5.3+1/OpenSpecFun.v0.5.3.powerpc64le-linux-gnu-libgfortran3.tar.gz to /tmp/jl_y2QFE6-download.gz...
######################################################################## 100.0%
[ Info: No hash cache found
[ Info: Calculated hash 964c133100e41f1b99c11d2177e78ebb72523ec154118c70ca25bbc51b81d3e1 for file /tmp/jl_y2QFE6-download.gz
[ Info: Unpacking /tmp/jl_y2QFE6-download.gz into /tmp/jl_UN4hrU...
ERROR: hash mismatch!
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] top-level scope at ./REPL[6]:6

At least, I think it's interesting because (I am unfamiliar with the basics, but) the downloaded item seems to have "powerpc64le" in its name, whereas my CPU comes from Intel. Details:

Julia Version 1.3.0
Commit 46ce4d7933 (2019-11-26 06:09 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
  CPU: Intel(R) Core(TM) i7-4770 CPU @ 3.40GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-6.0.1 (ORCJIT, haswell)

I hope there is something relevant in here. Thanks.

ghost · 2019-11-28T09:58:05Z

On my machine all the hashes look correct;
:
passes. Does that error for you?

Yes. There's a hash mismatch. The end of the trace:

--2019-11-28 09:50:35--  https://github.com/JuliaBinaryWrappers/OpenSpecFun_jll.jl/releases/download/OpenSpecFun-v0.5.3+1/OpenSpecFun.v0.5.3.powerpc64le-linux-gnu-libgfortran3.tar.gz
Resolving github.com (github.com)... 140.82.118.4
Connecting to github.com (github.com)|140.82.118.4|:443... connected.
HTTP request sent, awaiting response... 302 Found
Location: https://github-production-release-asset-2e65be.s3.amazonaws.com/205283016/20afff80-d9f9-11e9-8611-37a93729c4cf?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Credential=AKIAIWNJYAX4CSVEH53A%2F20191128%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20191128T095035Z&X-Amz-Expires=300&X-Amz-Signature=e4f42b31dd8f0a51568cb309490f62169913a88deead0ab2643dbf63bd962596&X-Amz-SignedHeaders=host&actor_id=0&response-content-disposition=attachment%3B%20filename%3DOpenSpecFun.v0.5.3.powerpc64le-linux-gnu-libgfortran3.tar.gz&response-content-type=application%2Foctet-stream [following]
--2019-11-28 09:50:35--  https://github-production-release-asset-2e65be.s3.amazonaws.com/205283016/20afff80-d9f9-11e9-8611-37a93729c4cf?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Credential=AKIAIWNJYAX4CSVEH53A%2F20191128%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20191128T095035Z&X-Amz-Expires=300&X-Amz-Signature=e4f42b31dd8f0a51568cb309490f62169913a88deead0ab2643dbf63bd962596&X-Amz-SignedHeaders=host&actor_id=0&response-content-disposition=attachment%3B%20filename%3DOpenSpecFun.v0.5.3.powerpc64le-linux-gnu-libgfortran3.tar.gz&response-content-type=application%2Foctet-stream
Resolving github-production-release-asset-2e65be.s3.amazonaws.com (github-production-release-asset-2e65be.s3.amazonaws.com)... 52.217.36.20
Connecting to github-production-release-asset-2e65be.s3.amazonaws.com (github-production-release-asset-2e65be.s3.amazonaws.com)|52.217.36.20|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 205399 (201K) [application/octet-stream]
Saving to: ‘/tmp/jl_9bkc5j-download.gz’

/tmp/jl_9bkc5j-down 100%[===================>] 200.58K   143KB/s    in 1.4s    

2019-11-28 09:50:37 (143 KB/s) - ‘/tmp/jl_9bkc5j-download.gz’ saved [205399/205399]

[ Info: No hash cache found
[ Info: Calculated hash 964c133100e41f1b99c11d2177e78ebb72523ec154118c70ca25bbc51b81d3e1 for file /tmp/jl_9bkc5j-download.gz
[ Info: Unpacking /tmp/jl_9bkc5j-download.gz into /tmp/jl_glFMHm...
ERROR: hash mismatch!
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] top-level scope at ./REPL[15]:6

julia>

fredrikekre · 2019-11-28T10:03:28Z

At least, I think it's interesting because (I am unfamiliar with the basics, but) the downloaded item seems to have "powerpc64le" in its name, whereas my CPU comes from Intel. Details:

The snippet there downloads all different versions.

So it looks like we compute the hash wrong then, alternatively that your unpacking engines do something weird.

fredrikekre · 2019-11-28T10:07:21Z

What unpack engine do you get from:

julia> Pkg.PlatformEngines.probe_platform_engines!()

julia> Pkg.PlatformEngines.gen_unpack_cmd("file.tar.gz", "/tmp/file")
`tar -xzf file.tar.gz -C/tmp/file`

Edit:

$ tar --version
tar (GNU tar) 1.28

giordano · 2019-11-28T10:10:37Z

For the record, I don't have any hash mismatch and get the same unpack command as Fredrik

ghost · 2019-11-28T11:05:29Z

julia> Pkg.PlatformEngines.gen_unpack_cmd("file.tar.gz", "/tmp/file")
`tar -xzf file.tar.gz -C/tmp/file`

and

$ tar --version
tar (GNU tar) 1.30

This is the version of tar that is running on /both/ machines where I'm encountering this difficulty.

giordano · 2019-11-28T15:47:38Z

% tar --version
tar (GNU tar) 1.32

PhilipLoewen · 2019-11-28T16:32:25Z

julia> Pkg.PlatformEngines.gen_unpack_cmd("file.tar.gz", "/tmp/file")
`tar -xzf file.tar.gz -C/tmp/file`

julia> exit()
philip@ella1804 ~ $ tar --version
tar (GNU tar) 1.29

giordano · 2019-11-28T17:58:22Z

Suggested by @StefanKarpinski: what's your umask?

% umask 
022

StefanKarpinski · 2019-11-28T17:59:13Z

It's unclear from this discussion to me if the problem is that different tar versions are extracting tarballs differently or if GitTools.tree_hash is computing hashes differently. In particular, I find this line a bit fishy:

https://github.com/JuliaLang/Pkg.jl/blob/258d74ecd4104aadb34ff65f38/src/GitTools.jl#L205

This line looks like it only checks if the group executable bit is set, which seems like the wrong criterion for whether a file is considered executable or not. Seems like something that could be messed up by a strict umask setting. cc: @staticfloat, @simonbyrne — why is that the check?

ghost · 2019-11-28T18:36:52Z

Suggested by @StefanKarpinski: what's your umask?
% umask 
022

My for-the-worried umask

$ umask
0077

Too strict, perhaps?

StefanKarpinski · 2019-11-28T18:45:14Z

It's certainly not your fault! We should fix the git tree hash computation code to do the right thing. Which, I suspect is either

!iszero(filemode(path) & 0o111) or
!iszero(filemode(path) & 0o100).

The former considers a file to be executable if any executable bit is set while the latter considers it to be executable if and only if the user executable bit is set. It's possible that's what this code was meant to do, but instead it's considering a file executable if and only if the group executable bit is set, which is just kind of odd. We should do the same thing as git does.

StefanKarpinski · 2019-11-28T18:52:37Z

Looks like just looking at the user executable bit is the right thing.

ghost · 2019-11-28T20:30:57Z

I can confirm that /temporarily/ :-) setting umask to 022 removed the blockage and has allowed the update to complete.

I have to express astonishment (and huge gratitude) for the attention that this issue was given. Thanks to all who helped.

PhilipLoewen · 2019-11-28T22:39:34Z

I'm delighted to confirm that this fix (setting umask to 0022) works for me, too. Add my thanks to that already sent by healy-pa!

StefanKarpinski · 2019-11-29T12:54:09Z

I have to confess that I had already noticed that line and been a bit suspicious of it and wish that I had investigated more before we made the 1.3.0 release. Apologies for the breakage—we may want to release a 1.3.1 release with this fix included somewhat soon so that people with strict umasks can use the 1.3 Julia release. Thank you for reporting the issue!

StefanKarpinski · 2019-11-29T19:17:34Z

Ok, this should now be fixed with Pkg master as of JuliaLang/Pkg.jl#1513. In order to close this, someone (quite possibly me) needs to set a strict umask and reproduce this failure with 1.3.0 and then try it with the fix and verify that it is indeed fixed.

This fixes some recently-reported issues with restrictive `umask`'s and the `Pkg.Artifacts` git tree hash calculation. X-ref: JuliaPackaging/BinaryBuilder.jl#527

staticfloat · 2019-11-30T01:27:31Z

Yes, it should be only the user flag, not the group flag. I or Simon must have missed a 0 when typing up the octal constant.

I have confirmed that building Julia with the latest Pkg works to fix the issue with a restrictive umask.

This fixes some recently-reported issues with restrictive `umask`'s and the `Pkg.Artifacts` git tree hash calculation. X-ref: JuliaPackaging/BinaryBuilder.jl#527

daxinnan · 2019-12-16T08:18:04Z

I have a similar problem about OpenBLAS, I don't know whether it's happened by the same reason or not:

(v1.3) pkg> up
  Updating registry at `~/.julia/registries/General`
  Updating git-repo `https://github.com/JuliaRegistries/General.git`
 Resolving package versions...
   Cloning [336ed68f-0bac-5ca0-87d4-7b16caf5d00b] CSV from https://github.com/JuliaData/CSV.jl.git
 Installed CSV ─ v0.5.20
ERROR: Unable to automatically install 'OpenBLAS' from '/home/lxc/.julia/packages/OpenBLAS_jll/vi57R/Artifacts.toml'
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] #ensure_artifact_installed#42(::Pkg.BinaryPlatforms.Linux, ::Bool, ::typeof(Pkg.Artifacts.ensure_artifact_installed), ::String, ::Dict{String,Any}, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:810
 [3] (::Pkg.Artifacts.var"#kw##ensure_artifact_installed")(::NamedTuple{(:platform, :verbose),Tuple{Pkg.BinaryPlatforms.Linux,Bool}}, ::typeof(Pkg.Artifacts.ensure_artifact_installed), ::String, ::Dict{String,Any}, ::String) at ./none:0
 [4] #ensure_all_artifacts_installed#43(::Pkg.BinaryPlatforms.Linux, ::Nothing, ::Bool, ::Bool, ::typeof(Pkg.Artifacts.ensure_all_artifacts_installed), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:852
 [5] #ensure_all_artifacts_installed at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:0 [inlined]
 [6] #download_artifacts#78(::Pkg.BinaryPlatforms.Linux, ::Bool, ::typeof(Pkg.Operations.download_artifacts), ::Array{String,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:580
 [7] #download_artifacts at ./none:0 [inlined]
 [8] #download_artifacts#73(::Pkg.BinaryPlatforms.Linux, ::Bool, ::typeof(Pkg.Operations.download_artifacts), ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:570
 [9] download_artifacts(::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:569
 [10] up(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}, ::Pkg.Types.UpgradeLevel) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1103
 [11] #up#43(::Pkg.Types.UpgradeLevel, ::Pkg.Types.PackageMode, ::Bool, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.up), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:170
 [12] up at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:146 [inlined]
 [13] do_up!(::Dict{Symbol,Any}, ::Array{Pkg.Types.PackageSpec,1}, ::Dict{Symbol,Any}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:492
 [14] #invokelatest#1(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Base.invokelatest), ::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:709
 [15] invokelatest(::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:708
 [16] do_cmd!(::Pkg.REPLMode.Command, ::REPL.LineEditREPL) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:412
 [17] #do_cmd#23(::Bool, ::typeof(Pkg.REPLMode.do_cmd), ::REPL.LineEditREPL, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:391
 [18] do_cmd at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:387 [inlined]
 [19] (::Pkg.REPLMode.var"#28#31"{REPL.LineEditREPL,REPL.LineEdit.Prompt})(::REPL.LineEdit.MIState, ::Base.GenericIOBuffer{Array{UInt8,1}}, ::Bool) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:619
 [20] #invokelatest#1 at ./essentials.jl:709 [inlined]
 [21] invokelatest at ./essentials.jl:708 [inlined]
 [22] run_interface(::REPL.Terminals.TextTerminal, ::REPL.LineEdit.ModalInterface, ::REPL.LineEdit.MIState) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/REPL/src/LineEdit.jl:2306
 [23] run_frontend(::REPL.LineEditREPL, ::REPL.REPLBackendRef) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/REPL/src/REPL.jl:1045
 [24] run_repl(::REPL.AbstractREPL, ::Any) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/REPL/src/REPL.jl:201
 [25] (::Base.var"#770#772"{Bool,Bool,Bool,Bool})(::Module) at ./client.jl:382
 [26] #invokelatest#1 at ./essentials.jl:709 [inlined]
 [27] invokelatest at ./essentials.jl:708 [inlined]
 [28] run_main_repl(::Bool, ::Bool, ::Bool, ::Bool, ::Bool) at ./client.jl:366
 [29] exec_options(::Base.JLOptions) at ./client.jl:304
 [30] _start() at ./client.jl:460

versioninfo

julia> versioninfo()
Julia Version 1.3.0
Commit 46ce4d7933 (2019-11-26 06:09 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
  CPU: Intel(R) Core(TM) i7-4790 CPU @ 3.60GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-6.0.1 (ORCJIT, haswell)
Environment:
  JULIA_NUM_THREADS = 4
  JULIA_REVISE = manual

jw3126 · 2020-01-14T20:19:30Z

Similar looking error with IntelOpenMP here:

(ImageFiltering) pkg> up
  Updating registry at `~/.julia/registries/General`
  Updating git-repo `https://github.com/JuliaRegistries/General.git`
 Resolving package versions...
ERROR: Unable to automatically install 'IntelOpenMP' from '/home/jan/.julia/packages/IntelOpenMP_jll/hsAKN/Artifacts.toml'
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] #ensure_artifact_installed#42(::Pkg.BinaryPlatforms.Platform, ::Bool, ::typeof(Pkg.Artifacts.ensure_artifact_installed), ::String, ::Dict{String,Any}, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:873
 [3] (::Pkg.Artifacts.var"#kw##ensure_artifact_installed")(::NamedTuple{(:platform, :verbose),Tuple{Pkg.BinaryPlatforms.Linux,Bool}}, ::typeof(Pkg.Artifacts.ensure_artifact_installed), ::String, ::Dict{String,Any}, ::String) at ./none:0
 [4] #ensure_all_artifacts_installed#43(::Pkg.BinaryPlatforms.Platform, ::Nothing, ::Bool, ::Bool, ::typeof(Pkg.Artifacts.ensure_all_artifacts_installed), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:919
 [5] #ensure_all_artifacts_installed at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:0 [inlined]
 [6] #download_artifacts#78(::Pkg.BinaryPlatforms.Linux, ::Bool, ::typeof(Pkg.Operations.download_artifacts), ::Array{String,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:580
 [7] #download_artifacts at ./none:0 [inlined]
 [8] #download_artifacts#73(::Pkg.BinaryPlatforms.Linux, ::Bool, ::typeof(Pkg.Operations.download_artifacts), ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:570
 [9] download_artifacts(::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:569
 [10] up(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}, ::Pkg.Types.UpgradeLevel) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1103
 [11] #up#43(::Pkg.Types.UpgradeLevel, ::Pkg.Types.PackageMode, ::Bool, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.up), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:170
 [12] up at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:146 [inlined]
 [13] do_up!(::Dict{Symbol,Any}, ::Array{Pkg.Types.PackageSpec,1}, ::Dict{Symbol,Any}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:492
 [14] #invokelatest#1(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Base.invokelatest), ::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:709
 [15] invokelatest(::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:708
 [16] do_cmd!(::Pkg.REPLMode.Command, ::REPL.LineEditREPL) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:412
 [17] #do_cmd#23(::Bool, ::typeof(Pkg.REPLMode.do_cmd), ::REPL.LineEditREPL, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:391
 [18] do_cmd at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:387 [inlined]
 [19] (::Pkg.REPLMode.var"#28#31"{REPL.LineEditREPL,REPL.LineEdit.Prompt})(::REPL.LineEdit.MIState, ::Base.GenericIOBuffer{Array{UInt8,1}}, ::Bool) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:619
 [20] #invokelatest#1 at ./essentials.jl:709 [inlined]
 [21] invokelatest at ./essentials.jl:708 [inlined]
 [22] run_interface(::REPL.Terminals.TextTerminal, ::REPL.LineEdit.ModalInterface, ::REPL.LineEdit.MIState) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/REPL/src/LineEdit.jl:2306
 [23] run_frontend(::REPL.LineEditREPL, ::REPL.REPLBackendRef) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/REPL/src/REPL.jl:1045
 [24] run_repl(::REPL.AbstractREPL, ::Any) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/REPL/src/REPL.jl:201
 [25] (::Base.var"#770#772"{Bool,Bool,Bool,Bool})(::Module) at ./client.jl:382
 [26] #invokelatest#1 at ./essentials.jl:709 [inlined]
 [27] invokelatest at ./essentials.jl:708 [inlined]
 [28] run_main_repl(::Bool, ::Bool, ::Bool, ::Bool, ::Bool) at ./client.jl:366
 [29] exec_options(::Base.JLOptions) at ./client.jl:304
 [30] _start() at ./client.jl:460

(ImageFiltering) pkg> ^C

julia> versioninfo()
Julia Version 1.3.1
Commit 2d5741174c (2019-12-30 21:36 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
  CPU: Intel(R) Core(TM) i7-3630QM CPU @ 2.40GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-6.0.1 (ORCJIT, ivybridge)
Environment:
  JULIA_NUM_THREADS = 8

jw3126 · 2020-01-14T20:20:37Z

Also ZeroMQ

(v1.3) pkg> add IJulia
  Updating registry at `~/.julia/registries/General`
  Updating git-repo `https://github.com/JuliaRegistries/General.git`
 Resolving package versions...
ERROR: Unable to automatically install 'ZeroMQ' from '/home/jan/.julia/packages/ZeroMQ_jll/SbMEz/Artifacts.toml'
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] #ensure_artifact_installed#42(::Pkg.BinaryPlatforms.Platform, ::Bool, ::typeof(Pkg.Artifacts.ensure_artifact_installed), ::String, ::Dict{String,Any}, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:873
 [3] (::Pkg.Artifacts.var"#kw##ensure_artifact_installed")(::NamedTuple{(:platform, :verbose),Tuple{Pkg.BinaryPlatforms.Linux,Bool}}, ::typeof(Pkg.Artifacts.ensure_artifact_installed), ::String, ::Dict{String,Any}, ::String) at ./none:0
 [4] #ensure_all_artifacts_installed#43(::Pkg.BinaryPlatforms.Platform, ::Nothing, ::Bool, ::Bool, ::typeof(Pkg.Artifacts.ensure_all_artifacts_installed), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:919
 [5] #ensure_all_artifacts_installed at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:0 [inlined]
 [6] #download_artifacts#78(::Pkg.BinaryPlatforms.Linux, ::Bool, ::typeof(Pkg.Operations.download_artifacts), ::Array{String,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:580
 [7] #download_artifacts at ./none:0 [inlined]
 [8] #download_artifacts#73(::Pkg.BinaryPlatforms.Linux, ::Bool, ::typeof(Pkg.Operations.download_artifacts), ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:570
 [9] (::Pkg.Operations.var"#kw##download_artifacts")(::NamedTuple{(:platform,),Tuple{Pkg.BinaryPlatforms.Linux}}, ::typeof(Pkg.Operations.download_artifacts), ::Array{Pkg.Types.PackageSpec,1}) at ./none:0
 [10] #add#112(::Bool, ::Pkg.BinaryPlatforms.Linux, ::typeof(Pkg.Operations.add), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}, ::Array{Base.UUID,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1017
 [11] #add at ./none:0 [inlined]
 [12] #add#25(::Bool, ::Pkg.BinaryPlatforms.Linux, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.add), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:102
 [13] add(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:72
 [14] do_add!(::Dict{Symbol,Any}, ::Array{Pkg.Types.PackageSpec,1}, ::Dict{Symbol,Any}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:505
 [15] #invokelatest#1(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Base.invokelatest), ::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:709
 [16] invokelatest(::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:708
 [17] do_cmd!(::Pkg.REPLMode.Command, ::REPL.LineEditREPL) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:412
 [18] #do_cmd#23(::Bool, ::typeof(Pkg.REPLMode.do_cmd), ::REPL.LineEditREPL, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:391
 [19] do_cmd at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:387 [inlined]
 [20] (::Pkg.REPLMode.var"#28#31"{REPL.LineEditREPL,REPL.LineEdit.Prompt})(::REPL.LineEdit.MIState, ::Base.GenericIOBuffer{Array{UInt8,1}}, ::Bool) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:619
 [21] #invokelatest#1 at ./essentials.jl:709 [inlined]
 [22] invokelatest at ./essentials.jl:708 [inlined]
 [23] run_interface(::REPL.Terminals.TextTerminal, ::REPL.LineEdit.ModalInterface, ::REPL.LineEdit.MIState) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/REPL/src/LineEdit.jl:2306
 [24] run_frontend(::REPL.LineEditREPL, ::REPL.REPLBackendRef) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/REPL/src/REPL.jl:1045
 [25] run_repl(::REPL.AbstractREPL, ::Any) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/REPL/src/REPL.jl:201
 [26] (::Base.var"#770#772"{Bool,Bool,Bool,Bool})(::Module) at ./client.jl:382
 [27] #invokelatest#1 at ./essentials.jl:709 [inlined]
 [28] invokelatest at ./essentials.jl:708 [inlined]
 [29] run_main_repl(::Bool, ::Bool, ::Bool, ::Bool, ::Bool) at ./client.jl:366
 [30] exec_options(::Base.JLOptions) at ./client.jl:304
 [31] _start() at ./client.jl:460

(v1.3) pkg> ^C

julia> versioninfo()
Julia Version 1.3.1
Commit 2d5741174c (2019-12-30 21:36 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
  CPU: Intel(R) Core(TM) i7-3630QM CPU @ 2.40GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-6.0.1 (ORCJIT, ivybridge)
Environment:
  JULIA_NUM_THREADS = 8

jw3126 · 2020-01-14T20:36:14Z

Hi! I was also getting an ERROR when trying to install the OpenSpecFun.
It looks like it was a conflict with the curl binary becasuse of the path. It was using the ...julia/usr/bin/curl
Just removing it solves the issue.

For me it was essentially the same problem.

staticfloat · 2020-01-14T21:11:45Z

@jw3126 if you still have the curl binary that came with Julia around, can you try manually downloading something with it (from Julia) by running the following:

using Pkg.PlatformEngines
probe_platform_engines!(verbose=true)
mktempdir() do dir
    download_verify(
        "https://github.com/JuliaBinaryWrappers/ZeroMQ_jll.jl/releases/download/ZeroMQ-v4.3.1+0/ZeroMQ.v4.3.1.x86_64-apple-darwin14.tar.gz",
        "3ce85d89aa9a21402a47081eefb66688214d3fdd033becebf18a3396fc2b165a",
        joinpath(dir, "foo");
        verbose=true,
	)
end

I'm curious what errors you're encountering.

jw3126 · 2020-01-14T21:19:32Z

julia> mktempdir() do dir
           download_verify(
               "https://github.com/JuliaBinaryWrappers/ZeroMQ_jll.jl/releases/download/ZeroMQ-v4.3.1+0/ZeroMQ.v4.3.1.x86_64-apple-darwin14.tar.gz",
               "3ce85d89aa9a21402a47081eefb66688214d3fdd033becebf18a3396fc2b165a",
               joinpath(dir, "foo");
               verbose=true,
               )
       end
[ Info: Downloading https://github.com/JuliaBinaryWrappers/ZeroMQ_jll.jl/releases/download/ZeroMQ-v4.3.1+0/ZeroMQ.v4.3.1.x86_64-apple-darwin14.tar.gz to /tmp/jl_LRqqpT/foo...
curl: /home/jan/juliadev/usr/lib/libcurl.so.4: no version information available (required by curl)
#=#=#                                                                         
curl: (60) Cert verify failed: BADCERT_NOT_TRUSTED
More details here: https://curl.haxx.se/docs/sslcerts.html

curl failed to verify the legitimacy of the server and therefore could not
establish a secure connection to it. To learn more about this situation and
how to fix it, please visit the web page mentioned above.
ERROR: Could not download https://github.com/JuliaBinaryWrappers/ZeroMQ_jll.jl/releases/download/ZeroMQ-v4.3.1+0/ZeroMQ.v4.3.1.x86_64-apple-darwin14.tar.gz to /tmp/jl_LRqqpT/foo:
ProcessFailedException(Base.Process[Process(`curl -C - '-#' -f -o /tmp/jl_LRqqpT/foo -L https://github.com/JuliaBinaryWrappers/ZeroMQ_jll.jl/releases/download/ZeroMQ-v4.3.1+0/ZeroMQ.v4.3.1.x86_64-apple-darwin14.tar.gz`, ProcessExited(60))])
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] #download#82(::Bool, ::typeof(Pkg.PlatformEngines.download), ::String, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/PlatformEngines.jl:591
 [3] #download at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/PlatformEngines.jl:0 [inlined]
 [4] #download_verify#83(::Bool, ::Bool, ::Bool, ::typeof(download_verify), ::String, ::String, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/PlatformEngines.jl:642
 [5] #download_verify at ./none:0 [inlined]
 [6] #3 at ./REPL[3]:2 [inlined]
 [7] #mktempdir#18(::String, ::typeof(mktempdir), ::var"#3#4", ::String) at ./file.jl:634
 [8] mktempdir(::Function, ::String) at ./file.jl:632 (repeats 2 times)
 [9] top-level scope at REPL[3]:1
caused by [exception 1]
failed process: Process(`curl -C - '-#' -f -o /tmp/jl_LRqqpT/foo -L https://github.com/JuliaBinaryWrappers/ZeroMQ_jll.jl/releases/download/ZeroMQ-v4.3.1+0/ZeroMQ.v4.3.1.x86_64-apple-darwin14.tar.gz`, ProcessExited(60)) [60]

Stacktrace:
 [1] pipeline_error at ./process.jl:525 [inlined]
 [2] #run#565(::Bool, ::typeof(run), ::Cmd, ::Tuple{Base.DevNull,Base.TTY,Base.TTY}) at ./process.jl:440
 [3] run(::Cmd, ::Tuple{Base.DevNull,Base.TTY,Base.TTY}) at ./process.jl:438
 [4] #download#82(::Bool, ::typeof(Pkg.PlatformEngines.download), ::String, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/PlatformEngines.jl:586
 [5] #download at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/PlatformEngines.jl:0 [inlined]
 [6] #download_verify#83(::Bool, ::Bool, ::Bool, ::typeof(download_verify), ::String, ::String, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/PlatformEngines.jl:642
 [7] #download_verify at ./none:0 [inlined]
 [8] #3 at ./REPL[3]:2 [inlined]
 [9] #mktempdir#18(::String, ::typeof(mktempdir), ::var"#3#4", ::String) at ./file.jl:634
 [10] mktempdir(::Function, ::String) at ./file.jl:632 (repeats 2 times)
 [11] top-level scope at REPL[3]:1

staticfloat · 2020-01-14T21:33:37Z

What OS version are you on?

jw3126 · 2020-01-14T21:42:37Z

You mean

$ lsb_release -a
No LSB modules are available.
Distributor ID:	Ubuntu
Description:	Ubuntu 18.04.3 LTS
Release:	18.04
Codename:	bionic

?

daxinnan · 2020-01-15T05:28:29Z

Maybe it's a network error, set proxy and try again.

staticfloat · 2020-01-15T19:55:56Z

Hmmm, I can't reproduce on a fresh 18.04 installation. Can you give me any further details about your system? Are you behind a firewall or a proxy of some sort?

jw3126 · 2020-01-15T19:58:31Z

It's my private computer, there is no proxy or firewall. Nothing unusual about it come to my mind.

staticfloat · 2020-01-15T20:14:25Z

When you type which curl, what path does it give you?
Can you manually, (from a terminal) run curl -C - '-#' -f -o /tmp/foo -L https://github.com/JuliaBinaryWrappers/ZeroMQ_jll.jl/releases/download/ZeroMQ-v4.3.1+0/ZeroMQ.v4.3.1.x86_64-apple-darwin14.tar.gz?
What is the output of ldd $(which curl) and shasum -a 256 $(which curl)?

jw3126 · 2020-01-15T20:20:17Z

jan@jan-GE60-0NC-GE60-0ND:~$ which curl
/usr/bin/curl

jan@jan-GE60-0NC-GE60-0ND:~$ curl -C - '-#' -f -o /tmp/foo -L https://github.com/JuliaBinaryWrappers/ZeroMQ_jll.jl/releases/download/ZeroMQ-v4.3.1+0/ZeroMQ.v4.3.1.x86_64-apple-darwin14.tar.gz
curl: /home/jan/juliadev/usr/lib/libcurl.so.4: no version information available (required by curl)
##O=-#     #                                                                                                                                                                            
curl: (60) Cert verify failed: BADCERT_NOT_TRUSTED
More details here: https://curl.haxx.se/docs/sslcerts.html

curl failed to verify the legitimacy of the server and therefore could not
establish a secure connection to it. To learn more about this situation and
how to fix it, please visit the web page mentioned above.

jan@jan-GE60-0NC-GE60-0ND:~$ ldd $(which curl)
/usr/bin/curl: /home/jan/juliadev/usr/lib/libcurl.so.4: no version information available (required by /usr/bin/curl)
	linux-vdso.so.1 (0x00007ffd707f5000)
	libcurl.so.4 => /home/jan/juliadev/usr/lib/libcurl.so.4 (0x00007f4776bba000)
	libz.so.1 => /home/jan/juliadev/usr/lib/libz.so.1 (0x00007f477699d000)
	libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007f477677e000)
	libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f477638d000)
	libssh2.so.1 => /home/jan/juliadev/usr/lib/libssh2.so.1 (0x00007f477614d000)
	libmbedtls.so.12 => /home/jan/juliadev/usr/lib/libmbedtls.so.12 (0x00007f4775f0d000)
	libmbedx509.so.0 => /home/jan/juliadev/usr/lib/libmbedx509.so.0 (0x00007f4775cf2000)
	libmbedcrypto.so.3 => /home/jan/juliadev/usr/lib/libmbedcrypto.so.3 (0x00007f4775a7f000)
	librt.so.1 => /lib/x86_64-linux-gnu/librt.so.1 (0x00007f4775877000)
	/lib64/ld-linux-x86-64.so.2 (0x00007f4777072000)

jan@jan-GE60-0NC-GE60-0ND:~$ shasum -a 256 $(which curl)
c02e0efd22db6c4316631be5e7ad0edb27838384571f63031693f7d46e15cff9  /usr/bin/curl

staticfloat · 2020-01-15T20:21:41Z

You are picking up /home/jan/juliadev/usr/lib/libcurl.so.4 even from your shell? Do you have LD_LIBRARY_PATH defined in your environment?

jw3126 · 2020-01-15T20:29:10Z

Yes I have:

jan@jan-GE60-0NC-GE60-0ND:~$ echo $LD_LIBRARY_PATH
/home/jan/juliadev/usr/lib/

It was part of a hack to circumvent some bug when building julia a long time ago that forgot about.
I removed it now and now curl works and I can install ZMQ etc. Thanks a lot for the help @staticfloat

jw3126 · 2020-01-15T20:32:00Z

I think it was this one https://discourse.julialang.org/t/problem-building-julia-version-jl-llvm-6-0-not-found/11545

staticfloat · 2020-01-15T20:36:02Z

Great; I'm going to close this issue. If anyone has similar problems, please feel free to open a new issue.

Whale-fall · 2020-02-16T11:37:00Z

I can confirm that /temporarily/ :-) setting umask to 022 removed the blockage and has allowed the update to complete.

I have to express astonishment (and huge gratitude) for the attention that this issue was given. Thanks to all who helped.

I met the same problem on windows, can you give me some advice to fix it?

giordano · 2020-02-16T12:53:19Z

@Whale-fall could you please open a new issue, providing the full error message that you get?

This fixes some recently-reported issues with restrictive `umask`'s and the `Pkg.Artifacts` git tree hash calculation. X-ref: JuliaPackaging/BinaryBuilder.jl#527

AsadiMarziehAF · 2021-02-22T12:11:13Z

Hey,
I need to specify the full path to the Julia software on my computer and connect Julia to R and I need to execute the command in Julia but I have been getting errors.
The following text is the code that I used and the problem that occurred, and I can't install 'OpenSpecFun'.
Does anybody know how can I fix that?
Thank you so much
Marzieh

_ _ ()_ | Documentation: https://docs.julialang.org
() | () () |
_ _ | | __ _ | Type "?" for help, "]?" for Pkg help.
| | | | | | |/ ` | |
| | || | | | (| | | Version 1.5.3 (2020-11-09)
/ |_'|||_'_| | Official https://julialang.org/ release
|__/ |

julia> ENV["R_HOME"]="C:/PROGRA~~1/R/R-40~~1. 3"
"C:/PROGRA~~1/R/R-40~~1. 3"

julia> Base.include(Main,"C:/Users/ASADI/Documents/R/win-library/4.0/JuliaCall/j
ulia/setup.jl")
ERROR: LoadError: ArgumentError: Package RCall not found in current path:

Run import Pkg; Pkg.add("RCall") to install the RCall package.

Stacktrace:
[1] require(::Module, ::Symbol) at .\loading.jl:893
[2] include(::Function, ::Module, ::String) at .\Base.jl:380
[3] include(::Module, ::String) at .\Base.jl:368
[4] top-level scope at REPL[2]:1
in expression starting at C:\Users\ASADI\Documents\R\win-library\4.0\JuliaCall\j
ulia\setup.jl:72

julia> import Pkg;

julia> Pkg.add("RCall")
Updating registry at C:\Users\ASADI\.julia\registries\General
Updating git-repo https://github.com/JuliaRegistries/General.git
Resolving package versions...
Downloading artifact: OpenSpecFun
Exception setting "SecurityProtocol": "Cannot convert null to type "System.Net.
SecurityProtocolType" due to invalid enumeration values. Specify one of the fol
lowing enumeration values and try again. The possible enumeration values are "S
sl3, Tls"."
At line:1 char:35

[System.Net.ServicePointManager]:: <<<< SecurityProtocol =
- CategoryInfo : InvalidOperation: (:) [], RuntimeException
- FullyQualifiedErrorId : PropertyAssignmentException

Exception calling "DownloadFile" with "2" argument(s): "The underlying connecti
on was closed: An unexpected error occurred on a send."
At line:12 char:24

$webclient.DownloadFile <<<< ("https://pkg.julialang.org/artifact/e6e3e56185c
a54f071864e989e828f00f281f32f", "C:\Users\ASADI\AppData\Local\Temp\jl_NsBHhEfP2
O-download.gz")
- CategoryInfo : NotSpecified: (:) [], MethodInvocationException
- FullyQualifiedErrorId : DotNetMethodException
  Downloading artifact: OpenSpecFun
  Exception setting "SecurityProtocol": "Cannot convert null to type "System.Net.
  SecurityProtocolType" due to invalid enumeration values. Specify one of the fol
  lowing enumeration values and try again. The possible enumeration values are "S
  sl3, Tls"."
  At line:1 char:35
[System.Net.ServicePointManager]:: <<<< SecurityProtocol =
- CategoryInfo : InvalidOperation: (:) [], RuntimeException
- FullyQualifiedErrorId : PropertyAssignmentException

Exception calling "DownloadFile" with "2" argument(s): "The underlying connecti
on was closed: An unexpected error occurred on a send."
At line:7 char:24

$webclient.DownloadFile <<<< ("https://github.com/JuliaBinaryWrappers/OpenSpe
cFun_jll.jl/releases/download/OpenSpecFun-v0.5.3+3/OpenSpecFun.v0.5.3.x86_64-w6
4-mingw32-libgfortran5.tar.gz", "C:\Users\ASADI\AppData\Local\Temp\jl_g5JQbhrxA
O-download.gz")
- CategoryInfo : NotSpecified: (:) [], MethodInvocationException
- FullyQualifiedErrorId : DotNetMethodException
  ERROR: Unable to automatically install 'OpenSpecFun' from 'C:\Users\ASADI.julia
  \packages\OpenSpecFun_jll\Xw8XK\Artifacts.toml'
  Stacktrace:
  [1] error(::String) at .\error.jl:33
  [2] ensure_artifact_installed(::String, ::Dict{String,Any}, ::String; platform:
  :Pkg.BinaryPlatforms.Platform, verbose::Bool, quiet_download::Bool) at C:\buildb
  ot\worker\package_win64\build\usr\share\julia\stdlib\v1.5\Pkg\src\Artifacts.jl:8
  99
  [3] ensure_all_artifacts_installed(::String; platform::Pkg.BinaryPlatforms.Plat
  form, pkg_uuid::Nothing, include_lazy::Bool, verbose::Bool, quiet_download::Bool
  ) at C:\buildbot\worker\package_win64\build\usr\share\julia\stdlib\v1.5\Pkg\src
  Artifacts.jl:963
  [4] download_artifacts(::Pkg.Types.Context, ::Array{String,1}; platform::Pkg.Bi
  naryPlatforms.Windows, verbose::Bool) at C:\buildbot\worker\package_win64\build
  usr\share\julia\stdlib\v1.5\Pkg\src\Operations.jl:663
  [5] download_artifacts(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; p
  latform::Pkg.BinaryPlatforms.Windows, verbose::Bool) at C:\buildbot\worker\packa
  ge_win64\build\usr\share\julia\stdlib\v1.5\Pkg\src\Operations.jl:642
  [6] add(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}, ::Array{Base.UUI
  D,1}; preserve::Pkg.Types.PreserveLevel, platform::Pkg.BinaryPlatforms.Windows)
  at C:\buildbot\worker\package_win64\build\usr\share\julia\stdlib\v1.5\Pkg\src\Op
  erations.jl:1141
  [7] add(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; preserve::Pkg.Ty
  pes.PreserveLevel, platform::Pkg.BinaryPlatforms.Windows, kwargs::Base.Iterators
  .Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at C:\buildbot\worker\pa
  ckage_win64\build\usr\share\julia\stdlib\v1.5\Pkg\src\API.jl:188
  [8] add(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at C:\buildbot\w
  orker\package_win64\build\usr\share\julia\stdlib\v1.5\Pkg\src\API.jl:139
  [9] #add#21 at C:\buildbot\worker\package_win64\build\usr\share\julia\stdlib\v1
  .5\Pkg\src\API.jl:67 [inlined]
  [10] add at C:\buildbot\worker\package_win64\build\usr\share\julia\stdlib\v1.5
  Pkg\src\API.jl:67 [inlined]
  [11] #add#20 at C:\buildbot\worker\package_win64\build\usr\share\julia\stdlib\v
  1.5\Pkg\src\API.jl:66 [inlined]
  [12] add at C:\buildbot\worker\package_win64\build\usr\share\julia\stdlib\v1.5
  Pkg\src\API.jl:66 [inlined]
  [13] add(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTu
  ple{(),Tuple{}}}) at C:\buildbot\worker\package_win64\build\usr\share\julia\stdl
  ib\v1.5\Pkg\src\API.jl:65
  [14] add(::String) at C:\buildbot\worker\package_win64\build\usr\share\julia\st
  dlib\v1.5\Pkg\src\API.jl:65
  [15] top-level scope at REPL[4]:1

julia>

StefanKarpinski mentioned this issue Nov 28, 2019

fix GitTools.tree_hash executableness criterion JuliaLang/Pkg.jl#1513

Merged

StefanKarpinski mentioned this issue Nov 28, 2019

create: only look at user exe bit for execuableness JuliaIO/Tar.jl#6

Merged

staticfloat mentioned this issue Nov 30, 2019

Bump Pkg version to include fix to git tree hash calculation JuliaLang/julia#33985

Merged

jw3126 mentioned this issue Jan 14, 2020

Cannot install ZMQ.jl anymore JuliaInterop/ZMQ.jl#197

Closed

giordano mentioned this issue Jan 14, 2020

Future of Base.download JuliaLang/julia#27043

Closed

staticfloat closed this as completed Jan 15, 2020

jtackm mentioned this issue Mar 9, 2020

Failed to install FlashWeave meringlab/FlashWeave.jl#13

Closed

ghost mentioned this issue Apr 30, 2020

ERROR: Unable to automatically install ‘OpenBLAS’ #769

Closed

simeonschaub mentioned this issue Oct 23, 2020

git tree SHA mismatch JuliaPackaging/ArtifactUtils.jl#1

Closed

Non-Contradiction mentioned this issue Feb 17, 2021

julia_setup() not working with R 3.5.1 and Julia 1.0 Non-Contradiction/JuliaCall#61

Closed

updating to v1.3.0: Unable to automatically install 'OpenSpecFun' #527

updating to v1.3.0: Unable to automatically install 'OpenSpecFun' #527

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