Merge branch 'master' of https://github.com/LTLA/csaw

LTLA · Mar 14, 2019 · a97b9f7 · a97b9f7
2 parents b42595f + 3a9b75d
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,5 +1,5 @@
 Package: csaw
-Version: 1.17.7
+Version: 1.17.8
 Date: 2019-03-13
 Title: ChIP-Seq Analysis with Windows
 Authors@R: c(person("Aaron", "Lun", role=c("aut", "cre"), email =

diff --git a/R/csawUsersGuide.R b/R/csawUsersGuide.R
@@ -5,5 +5,5 @@ csawUsersGuide <- function()
 # 
 # written by Aaron Lun.
 {
-    browseURL(sprintf("http://bioconductor.org/%s/workflows/vignettes/csawUsersGuide/inst/doc/csawUsersGuide.pdf", BiocManager::version()))
+    browseURL(sprintf("https://bioconductor.org/packages/%s/csawUsersGuide/vignettes/csaw.pdf", BiocManager::version()))
 }
diff --git a/vignettes/csaw.Rmd b/vignettes/csaw.Rmd
@@ -13,6 +13,11 @@ vignette: >
   %\VignetteEncoding{UTF-8}    
 ---
 
+```{r, echo=FALSE, results="hide"}
+require(knitr)
+opts_chunk$set(error=FALSE, message=FALSE, warning=FALSE)
+```
+
 # Introduction
 
 The `r Biocpkg("csaw")` package is designed for the _de novo_ detection of differentially bound regions from ChIP-seq data.