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Fix report tests to match new variant table Continuous Integration #434: Commit dabf2c7 pushed by Redmar-van-den-Berg
February 5, 2025 14:27 11m 23s main
main
February 5, 2025 14:27 11m 23s
Use picard CollectMultipleMetrics Continuous Integration #433: Commit 7aeaa6c pushed by Redmar-van-den-Berg
February 5, 2025 14:03 8m 4s main
main
February 5, 2025 14:03 8m 4s
Add genomic HGVS to the PDF report, add column for exon number Continuous Integration #432: Commit 7d66741 pushed by Redmar-van-den-Berg
February 5, 2025 08:32 8m 33s main
main
February 5, 2025 08:32 8m 33s
Move link check to release tests Continuous Integration #431: Commit adb95d2 pushed by Redmar-van-den-Berg
February 5, 2025 07:43 7m 52s main
main
February 5, 2025 07:43 7m 52s
Include genomic HGVS in VEP annotation Continuous Integration #430: Commit ce48223 pushed by Redmar-van-den-Berg
February 5, 2025 07:25 1m 12s main
main
February 5, 2025 07:25 1m 12s
Run VEP vep_cache folder or with GTF/FASTA Continuous Integration #429: Commit ffeb955 pushed by Redmar-van-den-Berg
February 4, 2025 13:06 9m 10s main
main
February 4, 2025 13:06 9m 10s
Fix a bug with caching of report assets Continuous Integration #428: Commit e1fa04d pushed by Redmar-van-den-Berg
January 30, 2025 17:33 16m 41s main
main
January 30, 2025 17:33 16m 41s
Run VarDict job wiht 8 threads Continuous Integration #427: Commit 806ddf8 pushed by Redmar-van-den-Berg
January 29, 2025 14:12 16m 26s main
main
January 29, 2025 14:12 16m 26s
Include all report files as input Continuous Integration #426: Commit 1bb763c pushed by Redmar-van-den-Berg
January 28, 2025 11:58 23m 47s main
main
January 28, 2025 11:58 23m 47s
Revert "Rename the BAM file in the STAR rule" Continuous Integration #425: Commit 8173676 pushed by Redmar-van-den-Berg
January 28, 2025 10:35 2m 7s main
main
January 28, 2025 10:35 2m 7s
Rename the BAM file in the STAR rule Continuous Integration #424: Commit 01de29f pushed by Redmar-van-den-Berg
January 23, 2025 06:57 11m 6s main
main
January 23, 2025 06:57 11m 6s
Add slurm executor to conda environment Continuous Integration #423: Commit 0041049 pushed by Redmar-van-den-Berg
January 22, 2025 13:53 32m 13s main
main
January 22, 2025 13:53 32m 13s
Fix bug with 'minimised' field in VEP output Continuous Integration #422: Commit 7d75831 pushed by Redmar-van-den-Berg
January 13, 2025 13:48 14m 58s main
main
January 13, 2025 13:48 14m 58s
Retry documentation links three times Continuous Integration #421: Commit b24c79b pushed by Redmar-van-den-Berg
January 13, 2025 10:01 15m 28s main
main
January 13, 2025 10:01 15m 28s
Remove the Snakemake version from the PDF report Continuous Integration #420: Commit cf5bc43 pushed by Redmar-van-den-Berg
January 13, 2025 07:34 1m 14s main
main
January 13, 2025 07:34 1m 14s
Update Snakemake to 8.24 Continuous Integration #419: Commit 717d3ff pushed by Redmar-van-den-Berg
January 13, 2025 07:09 24m 24s main
main
January 13, 2025 07:09 24m 24s
Fix a bug with the Java runtime environment for Picard Continuous Integration #418: Commit 608ffee pushed by Redmar-van-den-Berg
January 10, 2025 13:24 19m 50s main
main
January 10, 2025 13:24 19m 50s
Fix formatting changelog Continuous Integration #417: Commit ebcc380 pushed by Redmar-van-den-Berg
January 7, 2025 10:28 15m 47s main
main
January 7, 2025 10:28 15m 47s
Revert "Local changes for HGVS-like descriptions" Continuous Integration #416: Commit c52c31f pushed by Redmar-van-den-Berg
January 6, 2025 10:20 12m 39s main
main
January 6, 2025 10:20 12m 39s
Use apptainer to run tests on github CI Continuous Integration #415: Commit 46ed7a2 pushed by Redmar-van-den-Berg
January 6, 2025 06:03 33m 13s main
main
January 6, 2025 06:03 33m 13s
Release v2.2.1 Continuous Integration #414: Commit bb3aca8 pushed by Redmar-van-den-Berg
December 19, 2024 15:25 24m 18s main
main
December 19, 2024 15:25 24m 18s
Publish release on tag creation Publish release on tag creation #15: by Redmar-van-den-Berg
December 19, 2024 15:22 23m 4s v2.2.1
v2.2.1
December 19, 2024 15:22 23m 4s
Continuous Integration Continuous Integration #413: by Redmar-van-den-Berg
December 19, 2024 15:22 24m 50s v2.2.1
v2.2.1
December 19, 2024 15:22 24m 50s
Update blacklist and hotspots Continuous Integration #412: Commit 5d4a7f1 pushed by XLIU-hub
December 18, 2024 15:15 17m 49s main
main
December 18, 2024 15:15 17m 49s
Blacklist some sections in the MultiQC report Continuous Integration #411: Commit ba2eb7b pushed by Redmar-van-den-Berg
December 18, 2024 14:52 17m 25s main
main
December 18, 2024 14:52 17m 25s