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Download MIMIC demo data for use in the ETL tests.
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tompollard committed Jan 11, 2024
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6 changes: 6 additions & 0 deletions .github/workflows/meds-etl-test.yml
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Expand Up @@ -38,6 +38,12 @@ jobs:
cd meds_etl
python -m pip install .
# Download MIMIC-IV-Demo (v2.2)
- name: Download MIMIC-IV-Demo (v2.2)
run: |
cd meds_etl
wget -r -N -c --no-host-directories --cut-dirs=1 -np -P tests/data https://physionet.org/files/mimic-iv-demo/2.2/
# Run MEDS-ETL tests
- name: Run MEDS-ETL tests
run: |
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