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@Juke34 Juke34 released this 28 Jun 14:01
· 180 commits to master since this release
v0.7.0
189c88c
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Learn about vigilant mode.

  • Dramatically speed up the parser in special invocation of the check l3 linked to l1

  • Fix #103 ( agat_sp_manage_functional_annotation)

  • Fix #108 (agat_sp_manage_functional_annotation)

  • add test for agat_sp_manage_functional_annotation

  • fix #128 Add warning when l2 not on same seq_id than its parent. Fix check_level1_positions to avoid to update location when L2 not on same seq_id than its parent.

  • fix #129

  • fix #135 for agat_convert_bed2gff.pl : wrong id was used for strand and score resulting in wrong strand in output

  • fix #139 fix if else statement to accept csv

  • fix #143 IDs not numbering properly in agat_sp_manage_IDs.pl

  • add new script agat_sq_count_attributes.pl to check attributes without modifying the file

  • speedup the script agat_sq_keep_annotation_from_fastaSeq.pl

  • rename agat_sq_keep_annotation_from_fastaSeq.pl into agat_sq_filter_feature_from_fasta.pl

  • Update pod and fix misspellings

  • Move CI from travis to github actions

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