Ocean obs prep ctest now processes ssts on 20180415 (#825)

The ctest for JGLOBAL_PREP_OCEAN_OBS runs on cycle 2018-04-15-12 like the rest of the g-w task ctests, and processes Metop B GHRSST using the GHRSST IODA converter, and puts them in the appropriate ROTDIR obs directory for later use. Another step towards #815 @ShastriPaturi you should probably give this a closer look --------- Co-authored-by: Guillaume Vernieres <guillaume.vernieres@noaa.gov>
NOAA-EMC · Dec 22, 2023 · a34773a · a34773a
1 parent 69ec001
commit a34773a
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Showing 8 changed files with 26,885 additions and 15 deletions.
diff --git a/parm/soca/obsproc/obs_list_obsproc.yaml b/parm/soca/obsproc/obs_list_obsproc.yaml
@@ -6,6 +6,7 @@ observers:
 - !INC ${OBS_YAML_DIR}/sss_smap.yaml
 - !INC ${OBS_YAML_DIR}/sss_smos.yaml
 - !INC ${OBS_YAML_DIR}/sst_noaa19_l3u.yaml
+- !INC ${OBS_YAML_DIR}/sst_metopb_l3u_so025.yaml
 - !INC ${OBS_YAML_DIR}/icec_emc.yaml
 - !INC ${OBS_YAML_DIR}/adt_3b_egm2008.yaml
 - !INC ${OBS_YAML_DIR}/icec_amsr2_north.yaml
diff --git a/parm/soca/obsproc/obsproc_config_test.yaml b/parm/soca/obsproc/obsproc_config_test.yaml
@@ -23,3 +23,13 @@ observations:
     obsproc subdir: 'ice'
     output file: icec_amsr2_north.ioda.nc
     obsproc regex: icec_amsr2_north_?.nc4
+- obs space:
+    name: sst_metopb_l3u_so025
+    provider: GHRSST
+    obsproc subdir: 'sst'
+    output file: sst_metopb_l3u_so025.ioda.nc
+    obsproc regex: '??????????????-STAR-L3U_GHRSST-SSTsubskin-AVHRRF_MB-ACSPO_V2.80-v02.0-fv01.0.nc'
+    bounds:
+      units: C
+      min: -3.0
+      max: 50.0
diff --git a/scripts/exglobal_prep_ocean_obs.py b/scripts/exglobal_prep_ocean_obs.py
@@ -69,6 +69,8 @@
                 obsprocSpace['input files'] = matchingFiles
                 obsprocSpace['window begin'] = windowBegin
                 obsprocSpace['window end'] = windowEnd
+                outputFilename = f"gdas.t{cyc}z.{obsSpaceName}.{PDY}{cyc}.nc4"
+                obsprocSpace['output file'] = outputFilename
 
                 iodaYamlFilename = obsprocSpaceName + '2ioda.yaml'
                 save_as_yaml(obsprocSpace, iodaYamlFilename)

diff --git a/test/soca/gw/prepdata.sh b/test/soca/gw/prepdata.sh
@@ -16,18 +16,23 @@ cdl2nc4() {
 
 project_source_dir=$1
 
+#cdl2nc4 ADT/rads_adt_3a_2021181.nc4 ${project_source_dir}/testdata/rads_adt_3a_2021181.cdl
+#cdl2nc4 ADT/rads_adt_3b_2021181.nc4 ${project_source_dir}/testdata/rads_adt_3b_2021181.cdl
+#cdl2nc4 icec/icec_amsr2_north_1.nc4 ${project_source_dir}/testdata/icec_amsr2_north_1.cdl
+#cdl2nc4 icec/icec_amsr2_north_2.nc4 ${project_source_dir}/testdata/icec_amsr2_north_2.cdl
+#cdl2nc4 icec/icec_amsr2_south_1.nc4 ${project_source_dir}/testdata/icec_amsr2_south_1.cdl
+#cdl2nc4 icec/icec_amsr2_south_2.nc4 ${project_source_dir}/testdata/icec_amsr2_south_2.cdl
+#cdl2nc4 SSS/sss_smap_1.nc4 ${project_source_dir}/testdata/sss_smap_1.cdl
+#cdl2nc4 SSS/sss_smap_2.nc4 ${project_source_dir}/testdata/sss_smap_2.cdl
+#cdl2nc4 SSS/sss_smos_1.nc4 ${project_source_dir}/testdata/sss_smos_1.cdl
+#cdl2nc4 SSS/sss_smos_2.nc4 ${project_source_dir}/testdata/sss_smos_2.cdl
+#cdl2nc4 sst/ghrsst_sst_mb_202107010000.nc4 ${project_source_dir}/testdata/ghrsst_sst_mb_202107010000.cdl
+#cdl2nc4 sst/ghrsst_sst_mb_202107010100.nc4 ${project_source_dir}/testdata/ghrsst_sst_mb_202107010100.cdl
+#cdl2nc4 sst/viirs_aod_1.nc4 ${project_source_dir}/testdata/viirs_aod_1.cdl
+#cdl2nc4 sst/viirs_aod_2.nc4 ${project_source_dir}/testdata/viirs_aod_2.cdl
+
+cdl2nc4 sst/20180415114000-STAR-L3U_GHRSST-SSTsubskin-AVHRRF_MB-ACSPO_V2.80-v02.0-fv01.0.nc ${project_source_dir}/test/soca/testdata/20180415114000-STAR-L3U_GHRSST-SSTsubskin-AVHRRF_MB-ACSPO_V2.80-v02.0-fv01.0.cdl
+cdl2nc4 sst/20180415132000-STAR-L3U_GHRSST-SSTsubskin-AVHRRF_MB-ACSPO_V2.80-v02.0-fv01.0.nc ${project_source_dir}/test/soca/testdata/20180415132000-STAR-L3U_GHRSST-SSTsubskin-AVHRRF_MB-ACSPO_V2.80-v02.0-fv01.0.cdl
+cdl2nc4 sst/20180415095000-STAR-L3U_GHRSST-SSTsubskin-AVHRRF_MB-ACSPO_V2.80-v02.0-fv01.0.nc ${project_source_dir}/test/soca/testdata/20180415095000-STAR-L3U_GHRSST-SSTsubskin-AVHRRF_MB-ACSPO_V2.80-v02.0-fv01.0.cdl
+
 
-cdl2nc4 ADT/rads_adt_3a_2021181.nc4 ${project_source_dir}/testdata/rads_adt_3a_2021181.cdl
-cdl2nc4 ADT/rads_adt_3b_2021181.nc4 ${project_source_dir}/testdata/rads_adt_3b_2021181.cdl
-cdl2nc4 icec/icec_amsr2_north_1.nc4 ${project_source_dir}/testdata/icec_amsr2_north_1.cdl
-cdl2nc4 icec/icec_amsr2_north_2.nc4 ${project_source_dir}/testdata/icec_amsr2_north_2.cdl
-cdl2nc4 icec/icec_amsr2_south_1.nc4 ${project_source_dir}/testdata/icec_amsr2_south_1.cdl
-cdl2nc4 icec/icec_amsr2_south_2.nc4 ${project_source_dir}/testdata/icec_amsr2_south_2.cdl
-cdl2nc4 SSS/sss_smap_1.nc4 ${project_source_dir}/testdata/sss_smap_1.cdl
-cdl2nc4 SSS/sss_smap_2.nc4 ${project_source_dir}/testdata/sss_smap_2.cdl
-cdl2nc4 SSS/sss_smos_1.nc4 ${project_source_dir}/testdata/sss_smos_1.cdl
-cdl2nc4 SSS/sss_smos_2.nc4 ${project_source_dir}/testdata/sss_smos_2.cdl
-cdl2nc4 sst/ghrsst_sst_mb_202107010000.nc4 ${project_source_dir}/testdata/ghrsst_sst_mb_202107010000.cdl
-cdl2nc4 sst/ghrsst_sst_mb_202107010100.nc4 ${project_source_dir}/testdata/ghrsst_sst_mb_202107010100.cdl
-cdl2nc4 sst/viirs_aod_1.nc4 ${project_source_dir}/testdata/viirs_aod_1.cdl
-cdl2nc4 sst/viirs_aod_2.nc4 ${project_source_dir}/testdata/viirs_aod_2.cdl
diff --git a/test/soca/gw/setup_obsproc.sh b/test/soca/gw/setup_obsproc.sh
@@ -13,7 +13,7 @@ cd ${test_dmpdir}
 
 mkdir SSS ADT icec sst
 
-${project_source_dir}/test/soca/gw/prepdata.sh ${project_source_dir}/utils/test/
+${project_source_dir}/test/soca/gw/prepdata.sh ${project_source_dir}
Original file line number	Diff line number	Diff line change
Expand Up		@@ -13,7 +13,7 @@ cd ${test_dmpdir}

		mkdir SSS ADT icec sst

		${project_source_dir}/test/soca/gw/prepdata.sh ${project_source_dir}/utils/test/
		${project_source_dir}/test/soca/gw/prepdata.sh ${project_source_dir}