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new loss term for internal waves: scattering to higher modes #33

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36d4f7f
Bugfix: cpu clock sync error
marshallward Dec 4, 2021
e48f4a7
+Add the new routine unit_no_scaling_init
Hallberg-NOAA Dec 6, 2021
59c5926
(*)Provide US arguments to 4 existing calls
Hallberg-NOAA Dec 6, 2021
3162bd0
+Make US arguments non-optional for 28 routines
Hallberg-NOAA Dec 6, 2021
763ddab
Docs: Add NASA-GMAO to consortium figure
marshallward Dec 6, 2021
582de2e
add infrastructure for residual term
Nov 29, 2021
196586d
add residual term loss on flux
Dec 8, 2021
6807892
clean up/ move to implicit update
Dec 8, 2021
3ce6a31
Merge branch 'dev/gfdl' into cpu_clock_sync_bugfix
Hallberg-NOAA Dec 9, 2021
833cd30
+Remove clocks inside of j-loops
Hallberg-NOAA Dec 5, 2021
8b5c1c8
Deallocate eta_PF_start to avoid a memory leak
Hallberg-NOAA Dec 5, 2021
3f46b6a
+Set find_salt_root if SHELF_THREE_EQN = .False.
Hallberg-NOAA Dec 5, 2021
ec553aa
+Obsolete ETA_TOLERANCE_AUX
Hallberg-NOAA Dec 5, 2021
d733714
(*)Fix extract_diabatic_member
Hallberg-NOAA Dec 10, 2021
5172c49
Warn if opacity_from_chl is called without fluxes
Hallberg-NOAA Dec 10, 2021
90739be
Correct comments describing advect_tracer args
Hallberg-NOAA Dec 10, 2021
3364af1
Update indexing of array passed to data_override.
wfcooke Dec 6, 2021
2319139
Correct out of bounds index (por_face_areaU) bug
Hallberg-NOAA Dec 7, 2021
05edb63
(*)Offline tracer read bug fix
Hallberg-NOAA Dec 10, 2021
fcfd238
+Refactored and rescaled the offline tracer code
Hallberg-NOAA Dec 11, 2021
09bcea2
Merge branch 'dev/gfdl' into cpu_clock_sync_bugfix
Hallberg-NOAA Dec 11, 2021
112ac49
+(*)Revised offline tracer algorithms
Hallberg-NOAA Dec 11, 2021
0895fe3
Merge branch 'dev/gfdl' into offline_tracer_fix
Hallberg-NOAA Dec 11, 2021
fbafcb1
Merge branch 'dev/gfdl' into mandatory_US_args
Hallberg-NOAA Dec 11, 2021
86b91dc
Merge pull request #29 from Hallberg-NOAA/mandatory_US_args
marshallward Dec 12, 2021
e452a29
Merge branch 'dev/gfdl' into cpu_clock_sync_bugfix
Hallberg-NOAA Dec 12, 2021
7ae28b8
Merge pull request #27 from marshallward/cpu_clock_sync_bugfix
Hallberg-NOAA Dec 13, 2021
8824671
Merge branch 'dev/gfdl' into consortium_fig_update
Hallberg-NOAA Dec 13, 2021
8f5dc28
Merge pull request #31 from marshallward/consortium_fig_update
Hallberg-NOAA Dec 13, 2021
cf931b1
Eliminate unneeded diagnostic arrays
Hallberg-NOAA Dec 9, 2021
170fffd
MOM_sponge cleanup
Hallberg-NOAA Dec 9, 2021
6feadd0
Use G%Rad_Earth_L in mct and NUOPC cap code
Hallberg-NOAA Dec 11, 2021
bbb9753
+Rescale some sea-surface height variables to [Z]
Hallberg-NOAA Dec 11, 2021
86eb106
Correct the units in two comments
Hallberg-NOAA Dec 15, 2021
049241c
+Rescaled optics%opacity_band
Hallberg-NOAA Dec 16, 2021
08cd63b
Merge branch 'dev/gfdl' into opacity_rescale
Hallberg-NOAA Dec 16, 2021
0544f9f
+(*)Avoid segmentation faults if PEN_SW_NBANDS = 0
Hallberg-NOAA Dec 16, 2021
50df270
Ice dynamics (#35)
OlgaSergienko Dec 17, 2021
12f29f6
Adding temperature restore capability for SPEAR. (#36)
wfcooke Dec 18, 2021
a902e75
+Add US args and rescale dt arg to generic tracers
Hallberg-NOAA Dec 13, 2021
9cb9304
EMC stochastic candidate 20211028 (#1538)
jiandewang Dec 20, 2021
986bc8c
Corrected the unit documentation for 31 variables
Hallberg-NOAA Dec 14, 2021
d244246
+Rescale tides and ramp-up times
Hallberg-NOAA Dec 14, 2021
9a5e218
Merge branch 'main' into main_to_dev_gfdl
marshallward Dec 21, 2021
bf43fd8
Merge pull request #47 from marshallward/main_to_dev_gfdl
adcroft Dec 21, 2021
5d4e8a1
(*)Removed problematic offline tracer lines
Hallberg-NOAA Dec 22, 2021
dad675a
Fix badge URL for codecov
adcroft Dec 22, 2021
34554d0
Merge branch 'dev/gfdl' into offline_tracer_fix
Hallberg-NOAA Dec 22, 2021
e3c0b72
Merge branch 'dev/gfdl' into offline_tracer_fix
Hallberg-NOAA Dec 22, 2021
f35edbd
Bugfix - calculate density integrals in ALE mode w/ pressure_reconstr…
MJHarrison-GFDL Dec 17, 2021
f865b24
Update MOM_PressureForce_FV.F90
marshallward Dec 23, 2021
b628748
Correct comments describing generic_tracer args
Hallberg-NOAA Dec 16, 2021
6bcea76
Fixes an uninitialized logical in FMS_cap
adcroft Dec 22, 2021
d9d82e3
Eliminate unneeded diagnostic arrays in CorAdCalc
Hallberg-NOAA Dec 23, 2021
a8a2039
Merge branch 'dev/gfdl' into opacity_rescale
Hallberg-NOAA Dec 27, 2021
1028ee0
Merge pull request #43 from Hallberg-NOAA/opacity_rescale
marshallward Dec 29, 2021
c32ec97
Merge branch 'dev/gfdl' into offline_tracer_fix
Hallberg-NOAA Dec 29, 2021
5ad8a2c
Deleted commented out offline tracer lines
Hallberg-NOAA Dec 29, 2021
2b2214d
(*)Use por_face_area in zonal_face_thickness
Hallberg-NOAA Dec 23, 2021
e5a5407
Merge branch 'dev/gfdl' into offline_tracer_fix
marshallward Dec 29, 2021
71cf831
Merge pull request #37 from Hallberg-NOAA/offline_tracer_fix
marshallward Dec 29, 2021
2d32631
Option to homogenize forces and fluxes (#51)
breichl Jan 3, 2022
df46be4
Hydrostatic initialization in ice cavities (#41)
MJHarrison-GFDL Jan 6, 2022
f7a2254
Rewrite horizontal regridding to use netCDF wrapper functions (#48)
marshallward Jan 8, 2022
d838ccd
Clean up non-standard syntax and whitespace
Hallberg-NOAA Jan 8, 2022
6da5c9b
Standardize code in calc_sfc_displacement
Hallberg-NOAA Jan 8, 2022
9f0018f
+(*)Change the remapping dzInterface argument sign
Hallberg-NOAA Jan 18, 2022
03a247e
Avoid divide by zero in horizontal_viscosity() with better_bound_kh
adcroft Jan 21, 2022
e63c405
Fix soft-conventional index capitalization in horizontal_viscosity()
adcroft Jan 21, 2022
65998cd
Esmg docs (#57)
kshedstrom Jan 26, 2022
3f58f8a
read_variable_2d modified to accept 3 or 4 dims
marshallward Feb 3, 2022
56401b6
+Add MOM_check_scaling.F90 and MOM_scaling_check.F90
Hallberg-NOAA Dec 22, 2021
75bf521
+Move MOM_scaling_check.F90 to MOM_unique_scales.F90
Hallberg-NOAA Jan 24, 2022
64f432f
Diabatic driver: energetic_PBL -> ePBL, flag check
marshallward Feb 16, 2022
fc5253f
(*)Correct memory declarations in MOM_regridding
Hallberg-NOAA Jan 24, 2022
c166358
Add optional argument to FMS2 version of get_field_size
MJHarrison-GFDL Feb 1, 2022
e841609
remove unnecessary optional flag
MJHarrison-GFDL Feb 2, 2022
6f6d4d6
Merge pull request #1556 from NOAA-GFDL/dev-gfdl-main-candidate-2022-…
marshallward Feb 17, 2022
5f56798
Merge branch 'main' into main_to_dev
marshallward Feb 18, 2022
32e1ecf
Fixes issues with the GME code and get_param calls for Leith options …
gustavo-marques Feb 20, 2022
149073f
Remove hard-wired parameter in adjustEtaToFitBathymetry (#69)
gustavo-marques Feb 20, 2022
712ff9e
Merge branch 'dev/gfdl' into main_to_dev
Hallberg-NOAA Feb 20, 2022
2e72b88
Merge pull request #71 from NOAA-GFDL/main_to_dev
Hallberg-NOAA Feb 21, 2022
d46dbc7
Report mean temperature from MOM_state_stats()
Hallberg-NOAA Dec 16, 2021
9c7bf29
+Add global_mass_int_EFP
Hallberg-NOAA Dec 16, 2021
8197cea
Use global_mass_integral in lateral_bdry_diff
Hallberg-NOAA Dec 16, 2021
1bf8220
(*)+Reproducing tracer stocks
Hallberg-NOAA Dec 16, 2021
a0d0238
(*)+Use reproducing stocks for all tracer packages
Hallberg-NOAA Feb 21, 2022
a468bee
Removed trailing white space
Hallberg-NOAA Feb 23, 2022
9caa701
(+) Refactor of MOM_file_parser
marshallward Feb 23, 2022
cf193a8
Merge pull request #74 from marshallward/file_parser_refactor
Hallberg-NOAA Feb 28, 2022
9a01cd5
+Add ALE options mimicking Hycom
Hallberg-NOAA Feb 26, 2022
4640461
(*)Avoid negative thicknesses in mixed_layer_restrat
Hallberg-NOAA Feb 24, 2022
dadd182
add infrastructure for residual term
Nov 29, 2021
b671a87
add residual term loss on flux
Dec 8, 2021
46d292c
clean up/ move to implicit update
Dec 8, 2021
0120792
parenthesis
Mar 9, 2022
6a208f1
Merge branch 'residualIW' of github.com:raphaeldussin/MOM6 into resid…
Mar 9, 2022
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+Set find_salt_root if SHELF_THREE_EQN = .False.
  Set find_salt_root even if SHELF_THREE_EQN = .False. to avoid using an
uninitialized logical to determine which parameters are logged.  Without this
the contents of some MOM_parameter_doc.all files could depend on the state of
uninitialized memory and was compiler dependent in some cases.  All answers are
bitwise identical, but in some cases the contents of MOM_parameter_doc files
could be corrected.
Hallberg-NOAA authored and marshallward committed Dec 9, 2021
commit 3f46b6a7f060a563a2ebb6be77ca86eedc44cfbe
8 changes: 4 additions & 4 deletions src/ice_shelf/MOM_ice_shelf.F90
Original file line number Diff line number Diff line change
@@ -1409,12 +1409,12 @@ subroutine initialize_ice_shelf(param_file, ocn_grid, Time, CS, diag, forces_in,
"If true, user specifies a constant nondimensional heat-transfer coefficient "//&
"(GAMMA_T_3EQ), from which the default salt-transfer coefficient is set "//&
"as GAMMA_T_3EQ/35. This is used with SHELF_THREE_EQN.", default=.false.)
if (CS%threeeq) then
call get_param(param_file, mdl, "SHELF_S_ROOT", CS%find_salt_root, &
call get_param(param_file, mdl, "SHELF_S_ROOT", CS%find_salt_root, &
"If SHELF_S_ROOT = True, salinity at the ice/ocean interface (Sbdry) "//&
"is computed from a quadratic equation. Otherwise, the previous "//&
"interactive method to estimate Sbdry is used.", default=.false.)
else
"interactive method to estimate Sbdry is used.", &
default=.false., do_not_log=.not.CS%threeeq)
if (.not.CS%threeeq) then
call get_param(param_file, mdl, "SHELF_2EQ_GAMMA_T", CS%gamma_t, &
"If SHELF_THREE_EQN is false, this the fixed turbulent "//&
"exchange velocity at the ice-ocean interface.", &