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Bump peter-evans/create-pull-request from 5 to 6 #74

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@dependabot dependabot bot commented on behalf of github Feb 4, 2024

Bumps peter-evans/create-pull-request from 5 to 6.

Release notes

Sourced from peter-evans/create-pull-request's releases.

Create Pull Request v6.0.0

Behaviour changes

  • The default values for author and committer have changed. See "What's new" below for details. If you are overriding the default values you will not be affected by this change.
  • On completion, the action now removes the temporary git remote configuration it adds when using push-to-fork. This should not affect you unless you were using the temporary configuration for some other purpose after the action completes.

What's new

  • Updated runtime to Node.js 20
    • The action now requires a minimum version of v2.308.0 for the Actions runner. Update self-hosted runners to v2.308.0 or later to ensure compatibility.
  • The default value for author has been changed to ${{ github.actor }} <${{ github.actor_id }}+${{ github.actor }}@users.noreply.github.com>. The change adds the ${{ github.actor_id }}+ prefix to the email address to align with GitHub's standard format for the author email address.
  • The default value for committer has been changed to github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>. This is to align with the default GitHub Actions bot user account.
  • Adds input git-token, the Personal Access Token (PAT) that the action will use for git operations. This input defaults to the value of token. Use this input if you would like the action to use a different token for git operations than the one used for the GitHub API.
  • push-to-fork now supports pushing to sibling repositories in the same network.
  • Previously, when using push-to-fork, the action did not remove temporary git remote configuration it adds during execution. This has been fixed and the configuration is now removed when the action completes.
  • If the pull request body is truncated due to exceeding the maximum length, the action will now suffix the body with the message "...[Pull request body truncated]" to indicate that the body has been truncated.
  • The action now uses --unshallow only when necessary, rather than as a default argument of git fetch. This should improve performance, particularly for large git repositories with extensive commit history.
  • The action can now be executed on one GitHub server and create pull requests on a different GitHub server. Server products include GitHub hosted (github.com), GitHub Enterprise Server (GHES), and GitHub Enterprise Cloud (GHEC). For example, the action can be executed on GitHub hosted and create pull requests on a GHES or GHEC instance.

What's Changed

New Contributors

Full Changelog: peter-evans/create-pull-request@v5.0.2...v6.0.0

Create Pull Request v5.0.2

⚙️ Fixes an issue that occurs when using push-to-fork and both base and head repositories are in the same org/user account.

What's Changed

Full Changelog: peter-evans/create-pull-request@v5.0.1...v5.0.2

Create Pull Request v5.0.1

What's Changed

Full Changelog: peter-evans/create-pull-request@v5.0.0...v5.0.1

Commits
  • b1ddad2 feat: v6 (#2717)
  • bb80902 build(deps-dev): bump @​types/node from 18.19.8 to 18.19.10 (#2712)
  • e0037d4 build(deps): bump peter-evans/create-or-update-comment from 3 to 4 (#2702)
  • 94b1f99 build(deps): bump peter-evans/find-comment from 2 to 3 (#2703)
  • 69c27ea build(deps-dev): bump ts-jest from 29.1.1 to 29.1.2 (#2685)
  • 7ea722a build(deps-dev): bump prettier from 3.2.2 to 3.2.4 (#2684)
  • 5ee839a build(deps-dev): bump @​types/node from 18.19.7 to 18.19.8 (#2683)
  • 60fc256 build(deps-dev): bump eslint-plugin-prettier from 5.1.2 to 5.1.3 (#2660)
  • 0c67723 build(deps-dev): bump @​types/node from 18.19.5 to 18.19.7 (#2661)
  • 4e288e8 build(deps-dev): bump prettier from 3.1.1 to 3.2.2 (#2659)
  • Additional commits viewable in compare view

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Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 5 to 6.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@v5...v6)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Feb 4, 2024
@dependabot dependabot bot requested review from a team, Moohan and shintoLamp and removed request for a team February 4, 2024 03:41
@Jennit07 Jennit07 enabled auto-merge February 12, 2024 12:08
@Jennit07 Jennit07 requested review from Jennit07 and removed request for Moohan and shintoLamp February 12, 2024 12:08
@Jennit07 Jennit07 added this pull request to the merge queue Feb 12, 2024
Merged via the queue into production with commit d04692f Feb 12, 2024
11 checks passed
@Jennit07 Jennit07 deleted the dependabot/github_actions/peter-evans/create-pull-request-6 branch February 12, 2024 12:14
github-merge-queue bot added a commit that referenced this pull request Aug 19, 2024
* Update maintainer to Megan (#69)

* Update README.Rmd (#64)

Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bug - speed up `get_chi()` (#68)

* Update to dev version

* Make testthat run in parallel

* Update variables to pass tests

* Update indiv number of variables

* Change exists tests to read

* Set an environment var to make testthat use multiple CPUs

* Revert changes and deal with NA chi/anon_chi

* Update documentation

* Style package

* Update tests so that they pass

* Style package

* fix tests

* Render `README.md` after changes to the `.Rmd` version

* exclude from tests for now

---------

Co-authored-by: James McMahon <james.mcmahon@phs.scot>
Co-authored-by: Jennit07 <Jennit07@users.noreply.github.com>

* Render `README.md` after changes to the `.Rmd` version (#70)

Co-authored-by: github-merge-queue[bot] <github-merge-queue[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump actions/checkout from 3 to 4 (#66)

Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v3...v4)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump peter-evans/create-pull-request from 4 to 5 (#65)

Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 4 to 5.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@v4...v5)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump stefanzweifel/git-auto-commit-action from 4 to 5 (#67)

Bumps [stefanzweifel/git-auto-commit-action](https://github.com/stefanzweifel/git-auto-commit-action) from 4 to 5.
- [Release notes](https://github.com/stefanzweifel/git-auto-commit-action/releases)
- [Changelog](https://github.com/stefanzweifel/git-auto-commit-action/blob/master/CHANGELOG.md)
- [Commits](stefanzweifel/git-auto-commit-action@v4...v5)

---
updated-dependencies:
- dependency-name: stefanzweifel/git-auto-commit-action
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump JamesIves/github-pages-deploy-action from 4.4.3 to 4.5.0 (#71)

Bumps [JamesIves/github-pages-deploy-action](https://github.com/jamesives/github-pages-deploy-action) from 4.4.3 to 4.5.0.
- [Release notes](https://github.com/jamesives/github-pages-deploy-action/releases)
- [Commits](JamesIves/github-pages-deploy-action@v4.4.3...v4.5.0)

---
updated-dependencies:
- dependency-name: JamesIves/github-pages-deploy-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump actions/upload-artifact from 3 to 4 (#72)

Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 3 to 4.
- [Release notes](https://github.com/actions/upload-artifact/releases)
- [Commits](actions/upload-artifact@v3...v4)

---
updated-dependencies:
- dependency-name: actions/upload-artifact
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump peter-evans/create-pull-request from 5 to 6 (#74)

Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 5 to 6.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@v5...v6)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump actions/cache from 3 to 4 (#73)

Bumps [actions/cache](https://github.com/actions/cache) from 3 to 4.
- [Release notes](https://github.com/actions/cache/releases)
- [Changelog](https://github.com/actions/cache/blob/main/RELEASES.md)
- [Commits](actions/cache@v3...v4)

---
updated-dependencies:
- dependency-name: actions/cache
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Update README.md (#75)

Updated to include reading in LTC 'catch all' variables

* change in episode file cost variable vector (#76)

Co-authored-by: marjom02 <megan.mcnicol2@nhs.scot>

* force keytime format to hms (#77)

* force keytime format to hms

* Update documentation

* visible binding for global variables like ‘keytime1’

* minor changes

* fix keytime in column names

* import hms

---------

Co-authored-by: lizihao-anu <lizihao-anu@users.noreply.github.com>

* Bump JamesIves/github-pages-deploy-action from 4.5.0 to 4.6.0 (#79)

Bumps [JamesIves/github-pages-deploy-action](https://github.com/jamesives/github-pages-deploy-action) from 4.5.0 to 4.6.0.
- [Release notes](https://github.com/jamesives/github-pages-deploy-action/releases)
- [Commits](JamesIves/github-pages-deploy-action@v4.5.0...v4.6.0)

---
updated-dependencies:
- dependency-name: JamesIves/github-pages-deploy-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* add vignette for SLFhelper documentation

* Style package

* Hide messages

* remove conflict

* Style package

* Split up documentation into 3 vignettes

* add a comparison table to show the efficiency improvement

* Update - round memory size

* replace columns by col_select and add tidyselect

* Style package

* update ep_file_vars and indiv_file_vars

* add session memory recommendation

* Update R-CMD-check.yaml

* fix cmd build error

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: James McMahon <james.mcmahon@phs.scot>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>
Co-authored-by: Jennit07 <Jennit07@users.noreply.github.com>
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: github-merge-queue[bot] <github-merge-queue[bot]@users.noreply.github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Megan McNicol <43570769+SwiftySalmon@users.noreply.github.com>
Co-authored-by: marjom02 <megan.mcnicol2@nhs.scot>
Co-authored-by: lizihao-anu <lizihao-anu@users.noreply.github.com>
Co-authored-by: Jennifer Thom <jennifer.thom@phs.scot>
github-merge-queue bot added a commit that referenced this pull request Aug 19, 2024
* Update to dev version

* Make testthat run in parallel

* Fix build tests (#63)

* Update variables to pass tests

* Update indiv number of variables

* Change exists tests to read

* Set an environment var to make testthat use multiple CPUs

---------

Co-authored-by: James McMahon <james.mcmahon@phs.scot>

* Bug/tidyselect not working (#85)

* Allow using tidyselect helpers with `col_select`

* Add some tests for tidyselect helpers

* Update documentation

* recid and partnership filter
allow for recid and partnership filter when they are not specified to select in columns

* Style package

* update tests

---------

Co-authored-by: Moohan <Moohan@users.noreply.github.com>
Co-authored-by: Zihao Li <lizihao_anu@outlook.com>
Co-authored-by: lizihao-anu <lizihao-anu@users.noreply.github.com>

* Documentation (#88)

* Update maintainer to Megan (#69)

* Update README.Rmd (#64)

Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bug - speed up `get_chi()` (#68)

* Update to dev version

* Make testthat run in parallel

* Update variables to pass tests

* Update indiv number of variables

* Change exists tests to read

* Set an environment var to make testthat use multiple CPUs

* Revert changes and deal with NA chi/anon_chi

* Update documentation

* Style package

* Update tests so that they pass

* Style package

* fix tests

* Render `README.md` after changes to the `.Rmd` version

* exclude from tests for now

---------

Co-authored-by: James McMahon <james.mcmahon@phs.scot>
Co-authored-by: Jennit07 <Jennit07@users.noreply.github.com>

* Render `README.md` after changes to the `.Rmd` version (#70)

Co-authored-by: github-merge-queue[bot] <github-merge-queue[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump actions/checkout from 3 to 4 (#66)

Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v3...v4)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump peter-evans/create-pull-request from 4 to 5 (#65)

Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 4 to 5.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@v4...v5)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump stefanzweifel/git-auto-commit-action from 4 to 5 (#67)

Bumps [stefanzweifel/git-auto-commit-action](https://github.com/stefanzweifel/git-auto-commit-action) from 4 to 5.
- [Release notes](https://github.com/stefanzweifel/git-auto-commit-action/releases)
- [Changelog](https://github.com/stefanzweifel/git-auto-commit-action/blob/master/CHANGELOG.md)
- [Commits](stefanzweifel/git-auto-commit-action@v4...v5)

---
updated-dependencies:
- dependency-name: stefanzweifel/git-auto-commit-action
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump JamesIves/github-pages-deploy-action from 4.4.3 to 4.5.0 (#71)

Bumps [JamesIves/github-pages-deploy-action](https://github.com/jamesives/github-pages-deploy-action) from 4.4.3 to 4.5.0.
- [Release notes](https://github.com/jamesives/github-pages-deploy-action/releases)
- [Commits](JamesIves/github-pages-deploy-action@v4.4.3...v4.5.0)

---
updated-dependencies:
- dependency-name: JamesIves/github-pages-deploy-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump actions/upload-artifact from 3 to 4 (#72)

Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 3 to 4.
- [Release notes](https://github.com/actions/upload-artifact/releases)
- [Commits](actions/upload-artifact@v3...v4)

---
updated-dependencies:
- dependency-name: actions/upload-artifact
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bump peter-evans/create-pull-request from 5 to 6 (#74)

Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 5 to 6.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@v5...v6)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump actions/cache from 3 to 4 (#73)

Bumps [actions/cache](https://github.com/actions/cache) from 3 to 4.
- [Release notes](https://github.com/actions/cache/releases)
- [Changelog](https://github.com/actions/cache/blob/main/RELEASES.md)
- [Commits](actions/cache@v3...v4)

---
updated-dependencies:
- dependency-name: actions/cache
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Update README.md (#75)

Updated to include reading in LTC 'catch all' variables

* change in episode file cost variable vector (#76)

Co-authored-by: marjom02 <megan.mcnicol2@nhs.scot>

* force keytime format to hms (#77)

* force keytime format to hms

* Update documentation

* visible binding for global variables like ‘keytime1’

* minor changes

* fix keytime in column names

* import hms

---------

Co-authored-by: lizihao-anu <lizihao-anu@users.noreply.github.com>

* Bump JamesIves/github-pages-deploy-action from 4.5.0 to 4.6.0 (#79)

Bumps [JamesIves/github-pages-deploy-action](https://github.com/jamesives/github-pages-deploy-action) from 4.5.0 to 4.6.0.
- [Release notes](https://github.com/jamesives/github-pages-deploy-action/releases)
- [Commits](JamesIves/github-pages-deploy-action@v4.5.0...v4.6.0)

---
updated-dependencies:
- dependency-name: JamesIves/github-pages-deploy-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

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* add vignette for SLFhelper documentation

* Style package

* Hide messages

* remove conflict

* Style package

* Split up documentation into 3 vignettes

* add a comparison table to show the efficiency improvement

* Update - round memory size

* replace columns by col_select and add tidyselect

* Style package

* update ep_file_vars and indiv_file_vars

* add session memory recommendation

* Update R-CMD-check.yaml

* fix cmd build error

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: James McMahon <james.mcmahon@phs.scot>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>
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* Update documentation (#90)

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* Bump JamesIves/github-pages-deploy-action from 4.6.0 to 4.6.3 (#82)

Bumps [JamesIves/github-pages-deploy-action](https://github.com/jamesives/github-pages-deploy-action) from 4.6.0 to 4.6.3.
- [Release notes](https://github.com/jamesives/github-pages-deploy-action/releases)
- [Commits](JamesIves/github-pages-deploy-action@v4.6.0...v4.6.3)

---
updated-dependencies:
- dependency-name: JamesIves/github-pages-deploy-action
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

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* Increment version number to 0.10.2 (#81)

* Increment version number to 0.10.2

* update description

* Update R-CMD-check.yaml

* Update yaml

---------

Co-authored-by: Zihao Li <zihao.li@phs.scot>

---------

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github-merge-queue bot added a commit that referenced this pull request Sep 9, 2024
* Update to dev version

* Make testthat run in parallel

* Fix build tests (#63)

* Update variables to pass tests

* Update indiv number of variables

* Change exists tests to read

* Set an environment var to make testthat use multiple CPUs

---------

Co-authored-by: James McMahon <james.mcmahon@phs.scot>

* Bug/tidyselect not working (#85)

* Allow using tidyselect helpers with `col_select`

* Add some tests for tidyselect helpers

* Update documentation

* recid and partnership filter
allow for recid and partnership filter when they are not specified to select in columns

* Style package

* update tests

---------

Co-authored-by: Moohan <Moohan@users.noreply.github.com>
Co-authored-by: Zihao Li <lizihao_anu@outlook.com>
Co-authored-by: lizihao-anu <lizihao-anu@users.noreply.github.com>

* Documentation (#88)

* Update maintainer to Megan (#69)

* Update README.Rmd (#64)

Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Bug - speed up `get_chi()` (#68)

* Update to dev version

* Make testthat run in parallel

* Update variables to pass tests

* Update indiv number of variables

* Change exists tests to read

* Set an environment var to make testthat use multiple CPUs

* Revert changes and deal with NA chi/anon_chi

* Update documentation

* Style package

* Update tests so that they pass

* Style package

* fix tests

* Render `README.md` after changes to the `.Rmd` version

* exclude from tests for now

---------

Co-authored-by: James McMahon <james.mcmahon@phs.scot>
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* Render `README.md` after changes to the `.Rmd` version (#70)

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* Bump actions/checkout from 3 to 4 (#66)

Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v3...v4)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-major
...

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* Bump peter-evans/create-pull-request from 4 to 5 (#65)

Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 4 to 5.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@v4...v5)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-major
...

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* Bump stefanzweifel/git-auto-commit-action from 4 to 5 (#67)

Bumps [stefanzweifel/git-auto-commit-action](https://github.com/stefanzweifel/git-auto-commit-action) from 4 to 5.
- [Release notes](https://github.com/stefanzweifel/git-auto-commit-action/releases)
- [Changelog](https://github.com/stefanzweifel/git-auto-commit-action/blob/master/CHANGELOG.md)
- [Commits](stefanzweifel/git-auto-commit-action@v4...v5)

---
updated-dependencies:
- dependency-name: stefanzweifel/git-auto-commit-action
  dependency-type: direct:production
  update-type: version-update:semver-major
...

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* Bump JamesIves/github-pages-deploy-action from 4.4.3 to 4.5.0 (#71)

Bumps [JamesIves/github-pages-deploy-action](https://github.com/jamesives/github-pages-deploy-action) from 4.4.3 to 4.5.0.
- [Release notes](https://github.com/jamesives/github-pages-deploy-action/releases)
- [Commits](JamesIves/github-pages-deploy-action@v4.4.3...v4.5.0)

---
updated-dependencies:
- dependency-name: JamesIves/github-pages-deploy-action
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  update-type: version-update:semver-minor
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* Bump actions/upload-artifact from 3 to 4 (#72)

Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 3 to 4.
- [Release notes](https://github.com/actions/upload-artifact/releases)
- [Commits](actions/upload-artifact@v3...v4)

---
updated-dependencies:
- dependency-name: actions/upload-artifact
  dependency-type: direct:production
  update-type: version-update:semver-major
...

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* Bump peter-evans/create-pull-request from 5 to 6 (#74)

Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 5 to 6.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@v5...v6)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-major
...

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* Bump actions/cache from 3 to 4 (#73)

Bumps [actions/cache](https://github.com/actions/cache) from 3 to 4.
- [Release notes](https://github.com/actions/cache/releases)
- [Changelog](https://github.com/actions/cache/blob/main/RELEASES.md)
- [Commits](actions/cache@v3...v4)

---
updated-dependencies:
- dependency-name: actions/cache
  dependency-type: direct:production
  update-type: version-update:semver-major
...

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* Update README.md (#75)

Updated to include reading in LTC 'catch all' variables

* change in episode file cost variable vector (#76)

Co-authored-by: marjom02 <megan.mcnicol2@nhs.scot>

* force keytime format to hms (#77)

* force keytime format to hms

* Update documentation

* visible binding for global variables like ‘keytime1’

* minor changes

* fix keytime in column names

* import hms

---------

Co-authored-by: lizihao-anu <lizihao-anu@users.noreply.github.com>

* Bump JamesIves/github-pages-deploy-action from 4.5.0 to 4.6.0 (#79)

Bumps [JamesIves/github-pages-deploy-action](https://github.com/jamesives/github-pages-deploy-action) from 4.5.0 to 4.6.0.
- [Release notes](https://github.com/jamesives/github-pages-deploy-action/releases)
- [Commits](JamesIves/github-pages-deploy-action@v4.5.0...v4.6.0)

---
updated-dependencies:
- dependency-name: JamesIves/github-pages-deploy-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

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* add vignette for SLFhelper documentation

* Style package

* Hide messages

* remove conflict

* Style package

* Split up documentation into 3 vignettes

* add a comparison table to show the efficiency improvement

* Update - round memory size

* replace columns by col_select and add tidyselect

* Style package

* update ep_file_vars and indiv_file_vars

* add session memory recommendation

* Update R-CMD-check.yaml

* fix cmd build error

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: James McMahon <james.mcmahon@phs.scot>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>
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* Update documentation (#90)

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* Bump JamesIves/github-pages-deploy-action from 4.6.0 to 4.6.3 (#82)

Bumps [JamesIves/github-pages-deploy-action](https://github.com/jamesives/github-pages-deploy-action) from 4.6.0 to 4.6.3.
- [Release notes](https://github.com/jamesives/github-pages-deploy-action/releases)
- [Commits](JamesIves/github-pages-deploy-action@v4.6.0...v4.6.3)

---
updated-dependencies:
- dependency-name: JamesIves/github-pages-deploy-action
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

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* Increment version number to 0.10.2 (#81)

* Increment version number to 0.10.2

* update description

* Update R-CMD-check.yaml

* Update yaml

---------

Co-authored-by: Zihao Li <zihao.li@phs.scot>

* Fix the tidyselect feature bug (#95)

* reconstruct read_slf to fix bug of selecting feature

* Update documentation

* remove TODO add a filter by recid as it has been done

* Style package

* update ep and individual file variables

---------

Co-authored-by: lizihao-anu <lizihao-anu@users.noreply.github.com>
Co-authored-by: Jennit07 <67372904+Jennit07@users.noreply.github.com>

* Increment version number to 0.10.4

* Update NEWS

---------

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