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S.-H. Dan Shim edited this page Jun 19, 2022
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Create a new environment
conda create --name pkpo2022fbs python=3.6
Install pip
conda install pip
Install fbs
pip install fbs
pip install pymatgen==2019.12.22
If certifi
error:
pip install pymatgen==2019.12.22 --ignore-installed certifi
pip install PyQt5==5.9.2 scipy==1.4.1 numpy==1.17 fabio==0.12.0 dill==0.3.4 pyFAI==0.20.0 matplotlib==3.2.0 statsmodels==0.10 lmfit periodictable xlwt pytheos
pkpo2022fbs
altgraph==0.17.2
ase==3.18.0
asteval==0.9.26
attrs==21.4.0
cached-property==1.5.2
certifi==2022.6.15
charset-normalizer==2.0.12
Click==7.0
cycler==0.10.0
dataclasses==0.8
decorator==4.4.2
dill==0.3.4
fabio==0.12.0
fbs==1.1.3
fbs-tutorial==1.0.0
Flask==1.1.1
FoxDot==0.8.8
future==0.18.2
gpaw==1.5.2
h5py==3.1.0
idna==3.3
importlib-metadata==4.8.3
install==1.3.5
itsdangerous==1.1.0
Jinja2==2.10.1
jsonschema==3.2.0
kiwisolver==1.1.0
lmfit==1.0.3
macholib==1.16
MarkupSafe==1.1.1
matplotlib==3.2.0
monty==2022.4.26
mpmath==1.2.1
networkx==2.5.1
numexpr==2.8.1
numpy==1.19.5
packaging==21.3
palettable==3.3.0
pandas==1.1.5
patsy==0.5.2
pefile==2022.5.30
pep517==0.12.0
periodictable==1.6.1
Pillow==8.4.0
plotly==5.8.2
PyDispatcher==2.0.5
pyFAI==0.20.0
PyInstaller==3.4
pymatgen==2019.12.22
pyparsing==2.4.2
pyproject-toml==0.0.10
PyQt5==5.9.2
pyrsistent==0.18.0
pytheos==0.0.1.dev30
python-dateutil==2.8.2
pytz==2022.1
requests==2.27.1
ruamel.yaml==0.17.21
ruamel.yaml.clib==0.2.6
scipy==1.4.1
silx==1.0.0
sip==4.19.8
six==1.12.0
spglib==1.16.5
statsmodels==0.10.0
sympy==1.9
tabulate==0.8.9
tenacity==8.0.1
toml==0.10.2
tomli==1.2.3
typing_extensions==4.1.1
uncertainties==3.1.6
urllib3==1.26.9
Werkzeug==0.15.6
xlwt==1.3.0
zipp==3.6.0
These were installed with official python distribution with virtual environment instructed in fbs
tutorial.
altgraph==0.17.2
asteval==0.9.26
cached-property==1.5.2
certifi==2022.5.18.1
charset-normalizer==2.0.12
cycler==0.11.0
dataclasses==0.8
decorator==4.4.2
dill==0.3.4
fabio==0.12.0
fbs==1.1.3
fbs-tutorial==1.0.0
future==0.18.2
h5py==3.1.0
idna==3.3
importlib-metadata==4.8.3
kiwisolver==1.3.1
lmfit==1.0.3
macholib==1.16
matplotlib==3.2.0
monty==2022.4.26
mpmath==1.2.1
networkx==2.5.1
numexpr==2.8.1
numpy==1.19.5
packaging==21.3
palettable==3.3.0
pandas==1.1.5
patsy==0.5.2
pefile==2022.5.30
periodictable==1.6.1
Pillow==8.4.0
plotly==5.8.2
pyFAI==0.20.0
PyInstaller==3.4
pymatgen==2020.12.31
pyparsing==3.0.7
PyQt5==5.9.2
pytheos==0.0.1.dev30
python-dateutil==2.8.2
pytz==2022.1
pywin32-ctypes==0.2.0
requests==2.27.1
ruamel.yaml==0.17.21
ruamel.yaml.clib==0.2.6
scipy==1.5.4
silx==1.0.0
sip==4.19.8
six==1.16.0
spglib==1.16.5
statsmodels==0.10.0
sympy==1.9
tabulate==0.8.9
tenacity==8.0.1
typing_extensions==4.1.1
uncertainties==3.1.6
urllib3==1.26.9
xlwt==1.3.0
zipp==3.6.0
Data types and functions
Plot and sidebars
Toolbars
Base pattern
Waterfall patterns
Background subtraction
Setup
Control gray scale
Azimuthal integration
JCPDSs
JCPDS, control the view
Make a jcpds from cif
Workflow
Tweak
Save Tweak to JCPDS
Get Tweak result
Peak fitting
Unit-cell fitting
Session
Output files
Publication-ready Cake plot
Illustrator-ready PeakPo plot
Install in anaconda
Update
Run PeakPo in python
Update history
Issues and Suggestions
Environments | FBS setup | APS setups
PeakPo with Jupyter