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Merge pull request #716 from MaxUlysse/munin
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update munin configuration
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maxulysse authored Jan 18, 2019
2 parents 006c352 + febecb3 commit 5a92b24
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -11,6 +11,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.

- [#710](https://github.com/SciLifeLab/Sarek/pull/710) - Improve release checklist and script
- [#711](https://github.com/SciLifeLab/Sarek/pull/711) - Improve configuration priorities
- [#716](https://github.com/SciLifeLab/Sarek/pull/716) - Update paths to containers and iGenomes

### `Removed`
- [#715](https://github.com/SciLifeLab/Sarek/pull/715) - Remove `defReferencesFiles` function from `buildReferences.nf`
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4 changes: 2 additions & 2 deletions conf/munin.config
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Expand Up @@ -11,8 +11,8 @@ env {
}

params {
containerPath = '/btb/containers/'
genome_base = params.genome == 'GRCh37' ? '/btb/references/Homo_sapiens/GATK/GRCh37/' : params.genome == 'GRCh38' ? '/btb/references/Homo_sapiens/GATK/GRCh38/' : 'References/smallGRCh37'
containerPath = '/data0/btb/containers/'
genome_base = params.genome == 'GRCh37' ? '/data0/btb/references/igenomes/Homo_sapiens/GATK/GRCh37/' : params.genome == 'GRCh38' ? '/data0/btb/references/igenomes/Homo_sapiens/GATK/GRCh38/' : 'References/smallGRCh37'
singleCPUMem = 15.GB
totalMemory = 754.GB
}
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