(devel/R-pak) Updated 0.3.1 to 0.4.0

# pak 0.4.0

* pak has much improved and more informative error messages now.
  This work is not yet finished, so if you find an unclear error message,
  please open an issue. Thank you!

* The solver is now more robust for non-canonical input (e.g. `DESCRIPTION`
  files) (r-lib/pak#423).

* Better installation output. Standard output and error are now
  collected together (r-lib/pkgdepends@0669f0f8c).

* The solver is now doing a better job when multiple versions of the
  same package are present in the same repository
  (r-lib/actions#559).

* `pkg_name_check()` now works again, it needed a fix after changes at
  https://crandb.r-pkg.org.

* Explicit package names in local and URL package sources, as in
  `package=local::...` or `package=url::...` are now parsed correctly in
  dependencies.

* pak is now more robust to `Archs` fields missing from the CRAN
  metadata for packages with compiled code
  (r-lib/pak#448).

* `url::` packages now always work correctly, even if the digest package is
  not installed (r-lib/pak#433).

* pak is now more robust when installing packages from subdirectories
  of GitHub repositories (r-lib/pak#431,
  @paleolimbot).

* Parameters `?reinstall`, `?source` and `?ignore` now work correctly when
  specified in the `package=?parameter` format (#294).

* The `?ignore` parameter works correctly now.

* Dependency resolution now does not fail if a package is not found.

* pak can now install `url::` remotes from GitHub.

* pak now does not fail when the package of a `.tar.gz` GitHub
  snapshot is in a subdirectory, or in a subdirectory of a subdirectory.

* pak now errors early if it cannot deduce the name of the package
  from a `Remotes` or `Config/Needs/*` entry.

* Solver failures now include details in some cases where previously they
  did not.

* pak can now update packages in Docker containers where the
  old version was installed in the different Docker later
  (r-lib/pak#251)

* Update R version -> Bioconductor version mapping. R 4.2.x now maps to
  Bioconductor 3.16.

devel/R-pak/Makefile

@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.3 2022/12/18 03:09:24 mef Exp $
+# $NetBSD: Makefile,v 1.4 2023/02/19 12:45:20 mef Exp $
 
 R_PKGNAME=	pak
-R_PKGVER=	0.3.1
+R_PKGVER=	0.4.0
 CATEGORIES=	devel
 
 MAINTAINER=	pkgsrc-users@NetBSD.org

devel/R-pak/distinfo

@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.5 2022/12/18 03:09:24 mef Exp $
+$NetBSD: distinfo,v 1.6 2023/02/19 12:45:20 mef Exp $
 
-BLAKE2s (R/pak_0.3.1.tar.gz) = 0d9a08e98f1823cda89a5075596024f61f8d2eb7ee982f05c0a4a0b2e692b78f
-SHA512 (R/pak_0.3.1.tar.gz) = aa312cef189b80f0d999811b5361273cdb7d3a6264732d3f146834ca11a25f222b7c8a5766f38cb181be85d8e6975e27d65f1d14c5a2f7913dc787593f725c8a
-Size (R/pak_0.3.1.tar.gz) = 120022 bytes
+BLAKE2s (R/pak_0.4.0.tar.gz) = bd504669d3e080b1379fd02b724deaaa4d2eec5edc03685259db01e6a88c13bd
+SHA512 (R/pak_0.4.0.tar.gz) = b27aa8cf257be1eae50b7e2b356ca95290f31dfc863834722edb51a0c8cf11d80bc6886e49793b733b42ab18c170d02de110388307a2c31432e42a7cfe1c246d
+Size (R/pak_0.4.0.tar.gz) = 139041 bytes