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Release 1.0.3#74

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hechtprojects merged 63 commits intodevelopamepproject/amep:developfrom release-1.0.xamepproject/amep:release-1.0.xCopy head branch name to clipboardOct 22, 2024

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Commits on Apr 22, 2024

• Merge pull request #20 from amepproject/release-1.0.x

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Commits on May 22, 2024

• Merge pull request #28 from amepproject/release-1.0.x

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Commits on Jun 17, 2024

• Added table of neccesary changes.

  kai-luca

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• WIP: gotta get that bus.

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Commits on Jun 18, 2024

• Fixed .gitignore to exclude test artifacts.

  kai-luca

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• All tests in base are refactored, work with new data and are cleaned up.

  kai-luca

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• All tests in continuum were bad. I removed them and will think about real tests to implement.

  kai-luca

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• Notes were updated to fit state.

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• Done up until test_functions. Think abut tests there.

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Commits on Jun 19, 2024

• load and order tests do not clutter up directories anymore.

  kai-luca

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• load and particle methods are fine now.

  kai-luca

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• pbc tests run fine now.

  kai-luca

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• reader tests work fine. They generate only the needed erroneous data.

  kai-luca

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• spatialcor tests work fine and are clean.

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• timecor tests work fine and are clean.

  kai-luca

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• timecor tests work fine and are clean

  kai-luca

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Commits on Jun 28, 2024

• Added some evaluate tests. They reck up some time when testing. But test coverage is going up.

  kai-luca

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Commits on Jul 8, 2024

• Fixed the zombie dependencies.

  kai-luca

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Commits on Jul 9, 2024

• Cleaned up test artifacts and added them to .gitignore.

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• Merge branch 'main' into refactor_tests

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• Migrated numpy.trapz to numpy.trapezoid depending on numpy.__version__.

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• Merge remote-tracking branch 'origin/refactor_tests' into refactor_tests

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Commits on Jul 11, 2024

• Added all we need to read out of the datasets to save in our format to the documentation.

  kai-luca

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• set nbins=50 default for VelDist and Psi6dist. fixes #32, #33

  

  Kay-Robert Dormann

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• specified examples for load.traj(). fixes #36

  

  Kay-Robert Dormann

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Commits on Jul 16, 2024

• adds example to amep.plot.new() and specifies documentation to include matplotlib.pyplot.subplots

  

  Kay-Robert Dormann

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Commits on Jul 18, 2024

• added comment to docstring. -still to do more

  

  Kay-Robert Dormann

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Commits on Jul 24, 2024

• WIP:Shortened __getitem__ and documented it. Now do the sphinx part.

  kai-luca

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• WIP: special functions are weird. They do NOT want to be documented.

  kai-luca

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Commits on Jul 25, 2024

• Trajectories reference what they contain now. I declared them to be sequences of the according type.

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Commits on Jul 26, 2024

• Trajectory tests check if ptype is compüatibkle with strings. They are.

  kai-luca

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• Cleaned up in base reader __read_data function.

  kai-luca

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Commits on Aug 15, 2024

• Merge branch 'gsd_reader' into issues_49_46

  

  Kay-Robert Dormann

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Commits on Aug 16, 2024

• WIP: GSDReader implementation started

  

  Kay-Robert Dormann

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Commits on Aug 19, 2024

• WIP: Going home to fetch some documents.

  kai-luca

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Commits on Aug 20, 2024

• added angmom to hdf5 file, fixes #52

  

  Kay-Robert Dormann

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• All functions and the Gaussian and Gaussian2d classes are documented.

  kai-luca

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• All fit classses are documented now. Also Maxwell-Boltzmann works now in arbitrary spatial dimensions. Maybe we should test if I killed anything.

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Commits on Oct 17, 2024

• Update utils.py

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• Update spatialcor.py

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• Update utils.py

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• Update plot.py

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• Update pbc.py

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Commits on Oct 18, 2024

• Update plot.py

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• Update order.py

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Commits on Oct 22, 2024

• Merge pull request #53 from amepproject/bug_patches_kayro

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• Merge pull request #54 from amepproject/document_fit_functions

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• Merge pull request #67 from amepproject/Box_boundary-corrections

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• WIP: type hints added

  

  Kay-Robert Dormann

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• wip: test

  

  Kay-Robert Dormann

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• readme restructured

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• added type hints in amep.evaluate

  

  Kay-Robert Dormann

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• fixed animate_trajectory fps in example. fixes #30

  

  Kay-Robert Dormann

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• added check for particle type info. fixes #46

  

  Kay-Robert Dormann

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• clarify particle type in get_particle_info

  

  Kay-Robert Dormann

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• corrected description in order.nearest_neighbors. fixes #39

  

  Kay-Robert Dormann

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• website restructured; plot.particles and plot.fields type hint corrected

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• fixed add_particle test

  

  Kay-Robert Dormann

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• fixed error 40

  

  Kay-Robert Dormann

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• removed unused dependency

  

  Kay-Robert Dormann

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• speed up tests

  

  Kay-Robert Dormann

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• readme and version updated for release

  

  Kay-Robert Dormann

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• Merge pull request #72 from amepproject/website-readme-optimization

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