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Kmeans notebook cleanup#946

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ngreenwald merged 16 commits intomainangelolab/ark-analysis:mainfrom neighborhood_nb_cleanupangelolab/ark-analysis:neighborhood_nb_cleanupCopy head branch name to clipboardMar 23, 2023

+134-115

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Commits on Feb 9, 2023

• get rid of Kmeans() warnings and update outputs for cropped dataset

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Commits on Feb 21, 2023

• Merge branch 'main' into neighborhood_nb_cleanup

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Commits on Mar 13, 2023

• Merge branch 'main' into neighborhood_nb_cleanup

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• numeric_only and figures update

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Commits on Mar 14, 2023

• more heatmap descriptions

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• Merge branch 'main' into neighborhood_nb_cleanup

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Commits on Mar 16, 2023

• Merge branch 'main' into neighborhood_nb_cleanup

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• description tweaks

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• read in existing neighbor mat

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Commits on Mar 21, 2023

• Merge branch 'main' into neighborhood_nb_cleanup

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• drop cell cluster col, import fix

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• Merge branch 'main' into neighborhood_nb_cleanup

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Commits on Mar 23, 2023

• notebook tweaks

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• Merge remote-tracking branch 'origin/neighborhood_nb_cleanup' into neighborhood_nb_cleanup

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• Merge branch 'main' into neighborhood_nb_cleanup

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• neighbors mat desc

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