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Code for ingesting omics data into omics storage based on iRODS capabilities

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Documentation Status Continuous Integration Status Codacy Badge Codacy Badge MIT License

RODEOS Ingest

Code for ingesting omics data into iRODS based on iRODS capability automated ingest (ICAI). This package provides the following modules and support the following data types.

module data type
rodeos_ingest.genomics.illumina.bcl Illumina run folders
rodeos_ingest.genomics.illumina.fastq FASTQ demultiplexing results

Please refer to the documentation on ReadTheDocs for more information.

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Code for ingesting omics data into omics storage based on iRODS capabilities

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