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Update sylph to 0.7.0 #51971

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merged 3 commits into from
Nov 7, 2024
Merged

Update sylph to 0.7.0 #51971

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a3e778c
Update sylph to 0.7.0
BiocondaBot Nov 6, 2024
0d372aa
Update meta.yaml
mencian Nov 6, 2024
e8c2e98
Update build.sh
mencian Nov 6, 2024
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4 changes: 0 additions & 4 deletions recipes/sylph/build.sh
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Original file line number Diff line number Diff line change
@@ -1,8 +1,4 @@
#!/bin/bash -euo

# Add workaround for SSH-based Git connections from Rust/cargo. See https://github.com/rust-lang/cargo/issues/2078 for details.
# We set CARGO_HOME because we don't pass on HOME to conda-build, thus rendering the default "${HOME}/.cargo" defunct.
export CARGO_NET_GIT_FETCH_WITH_CLI=true CARGO_HOME="$(pwd)/.cargo"

# build statically linked binary with Rust
RUST_BACKTRACE=1 cargo install --verbose --path . --root $PREFIX
9 changes: 5 additions & 4 deletions recipes/sylph/meta.yaml
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@@ -1,4 +1,4 @@
{% set version = "0.6.1" %}
{% set version = "0.7.0" %}

package:
name: sylph
Expand All @@ -11,12 +11,12 @@ build:

source:
url: https://github.com/bluenote-1577/sylph/archive/v{{ version }}.tar.gz
sha256: 9f384ecf33d5eed57e518c1cc238ffb5ac68948dcf921731ba77ccbd02b57bdb
sha256: 8d0dd0c4b64de9b4c7402f6a44a019b2f54aae0626308a6b8831b3239640b609

requirements:
build:
- {{ compiler("cxx") }}
- rust >=1.61
- {{ compiler("rust") }}
- make
- cmake >=3.12

Expand All @@ -27,10 +27,11 @@ test:
about:
home: https://github.com/bluenote-1577/sylph
license: MIT
license_family: MIT
summary: sylph quickly enables querying of genomes against even low-coverage shotgun metagenomes to find nearest neighbour ANI.
license_file: LICENSE
dev_url: https://github.com/bluenote-1577/sylph

extra:
recipe-maintainers:
- bluenote-1577