components/ endpoint displays intended information after auto-deploy

[mishaschwartz]

Overview

Previously, the script that generates the content for the components/ endpoint was using a feature of grep that is not supported by all versions of grep.

This meant that this script running in the auto-deployment docker container was not able to properly parse the running components using grep.

This fixes the issue by making the script compliant with all versions of grep.

Changes

Non-breaking changes

None: bugfix

Breaking changes

None

Related Issue / Discussion

• Resolves 🐛 [BUG]: /components endpoint is empty using auto-deploy #342

Additional Information

[fmigneault]

The change it addresses specifically looks fine.

However, the components/ of the latest test instance of this PR also experiences the issue #339

[mishaschwartz]

@fmigneault that issue is fixed in #344

[tlvu]

LGTM, thanks for looking into this annoying behavior.

[crim-jenkins-bot]

E2E Test Results

DACCS-iac Pipeline Results

Build URL : http://daccs-jenkins.crim.ca:80/job/DACCS-iac-birdhouse/1684/
Result : failure

BIRDHOUSE_DEPLOY_BRANCH : fix-components-after-autoreload
DACCS_CONFIGS_BRANCH : master
PAVICS_E2E_WORKFLOW_TESTS_BRANCH : master
PAVICS_SDI_BRANCH : master

DESTROY_INFRA_ON_EXIT : true
PAVICS_HOST : https://host-140-46.rdext.crim.ca

PAVICS-e2e-workflow-tests Pipeline Results

Tests URL : http://daccs-jenkins.crim.ca:80/job/PAVICS-e2e-workflow-tests/job/master/1201/

NOTEBOOK TEST RESULTS

    
[2023-06-16T18:01:14.837Z] ============================= test session starts ==============================
[2023-06-16T18:01:14.837Z] platform linux -- Python 3.9.16, pytest-7.3.1, pluggy-1.0.0
[2023-06-16T18:01:14.837Z] rootdir: /home/jenkins/agent/workspace/PAVICS-e2e-workflow-tests_master
[2023-06-16T18:01:14.837Z] plugins: anyio-3.6.1, dash-2.10.0, nbval-0.9.6, tornasync-0.6.0.post2, xdist-3.3.1
[2023-06-16T18:01:14.837Z] collected 245 items
[2023-06-16T18:01:14.837Z] 
[2023-06-16T18:01:23.527Z] notebooks-auth/test_thredds.ipynb ...........                            [  4%]
[2023-06-16T18:01:31.395Z] pavics-sdi-master/docs/source/notebooks/WCS_example.ipynb .......        [  7%]
[2023-06-16T18:01:39.474Z] pavics-sdi-master/docs/source/notebooks/WFS_example.ipynb ......         [  9%]
[2023-06-16T18:01:45.756Z] pavics-sdi-master/docs/source/notebooks/WMS_example.ipynb ........       [ 13%]
[2023-06-16T18:01:48.499Z] pavics-sdi-master/docs/source/notebooks/WPS_example.ipynb ..........     [ 17%]
[2023-06-16T18:14:29.220Z] pavics-sdi-master/docs/source/notebooks/climex.ipynb ............        [ 22%]
[2023-06-16T18:14:31.127Z] pavics-sdi-master/docs/source/notebooks/eccc-geoapi-climate-stations.ipynb . [ 22%]
[2023-06-16T18:14:39.386Z] ...............                                                          [ 28%]
[2023-06-16T18:14:49.519Z] pavics-sdi-master/docs/source/notebooks/eccc-geoapi-xclim.ipynb .....    [ 30%]
[2023-06-16T18:14:56.883Z] pavics-sdi-master/docs/source/notebooks/esgf-dap.ipynb .....F            [ 33%]
[2023-06-16T18:15:14.411Z] pavics-sdi-master/docs/source/notebooks/forecasts.ipynb ......           [ 35%]
[2023-06-16T18:15:16.056Z] pavics-sdi-master/docs/source/notebooks/jupyter_extensions.ipynb .       [ 35%]
[2023-06-16T18:15:21.079Z] pavics-sdi-master/docs/source/notebooks/opendap.ipynb .......            [ 38%]
[2023-06-16T18:15:25.779Z] pavics-sdi-master/docs/source/notebooks/pavics_thredds.ipynb .....       [ 40%]
[2023-06-16T18:18:08.448Z] pavics-sdi-master/docs/source/notebooks/regridding.ipynb ............... [ 46%]
[2023-06-16T18:19:12.297Z] .............                                                            [ 52%]
[2023-06-16T18:19:17.371Z] pavics-sdi-master/docs/source/notebooks/rendering.ipynb ....             [ 53%]
[2023-06-16T18:19:19.595Z] pavics-sdi-master/docs/source/notebooks/subset-user-input.ipynb ........ [ 57%]
[2023-06-16T18:19:36.635Z] .................                                                        [ 64%]
[2023-06-16T18:19:42.288Z] pavics-sdi-master/docs/source/notebooks/subsetting.ipynb .....           [ 66%]
[2023-06-16T18:19:43.674Z] pavics-sdi-master/docs/source/notebook-components/weaver_example.ipynb . [ 66%]
[2023-06-16T18:19:58.998Z] .FF......                                                                [ 70%]
[2023-06-16T18:20:09.479Z] finch-master/docs/source/notebooks/dap_subset.ipynb ...........          [ 74%]
[2023-06-16T18:20:19.092Z] finch-master/docs/source/notebooks/finch-usage.ipynb ......              [ 77%]
[2023-06-16T18:20:20.473Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-1DataAccess.ipynb . [ 77%]
[2023-06-16T18:20:24.031Z] ......                                                                   [ 80%]
[2023-06-16T18:20:34.034Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-2Subsetting.ipynb . [ 80%]
[2023-06-16T18:20:48.937Z] .............                                                            [ 85%]
[2023-06-16T18:20:58.916Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-3Climate-Indicators.ipynb . [ 86%]
[2023-06-16T18:21:37.933Z] ....s.                                                                   [ 88%]
[2023-06-16T18:21:46.058Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-4Ensembles.ipynb . [ 88%]
[2023-06-16T18:22:00.824Z] ...                                                                      [ 90%]
[2023-06-16T18:22:15.707Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-5Visualization.ipynb . [ 90%]
[2023-06-16T18:22:38.574Z] ......                                                                   [ 93%]
[2023-06-16T18:22:40.599Z] notebooks/hummingbird.ipynb ............                                 [ 97%]
[2023-06-16T18:25:45.047Z] notebooks/stress-tests.ipynb .....                                       [100%]
[2023-06-16T18:25:45.047Z] 
[2023-06-16T18:25:45.047Z] =================================== FAILURES ===================================