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Update SCHEMA variant data
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Resolves #23
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nawatts committed Sep 11, 2020
1 parent 91a3ced commit 86c8b62
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Showing 2 changed files with 4 additions and 4 deletions.
6 changes: 3 additions & 3 deletions data_pipeline/pipeline_config.ini
Original file line number Diff line number Diff line change
Expand Up @@ -22,8 +22,8 @@ variant_annotations_path = gs://epi25-browser/2018-11-27_epi25-exome-browser-var

[SCHEMA]
gene_results_path = gs://schema-browser/200831/schema-results-table-supplement.tsv
variant_results_path = gs://schema-browser/190415/2019-04-15_schema-browser-variant-results-table-meta-rare-denovos-common-merged.ht
variant_annotations_path = gs://schema-browser/200910/2020-09-10_schema-browser-variant-annotation-table.ht
variant_results_path = gs://schema-browser/200911/2020-09-11_schema-browser-variant-results-table-meta-rare-denovos-common-merged.ht
variant_annotations_path = gs://schema-browser/200911/2020-09-11_schema-browser-variant-annotation-table.ht

[reference_data]
grch37_gencode_path = gs://exome-results-browsers/reference/gencode.v19.gtf.bgz
Expand All @@ -44,4 +44,4 @@ service-account = erb-data-pipeline@exac-gnomad.iam.gserviceaccount.com

[output]
# Path for intermediate Hail files.
staging_path = gs://exome-results-browsers/data/200910
staging_path = gs://exome-results-browsers/data/200911
2 changes: 1 addition & 1 deletion deployment/manifests/deployment.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -50,5 +50,5 @@ spec:
- name: data
gcePersistentDisk:
fsType: ext4
pdName: exome-results-browsers-data-200911-1033
pdName: exome-results-browsers-data-200911-1851
readOnly: true

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