[prs] Distance-based PRS with corrected betas #1867
Workflow file for this run
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name: lint | |
on: [pull_request] | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ["3.11.9"] | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v3 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Set up cache for pip | |
uses: actions/cache@v3 | |
with: | |
path: | | |
~/.cache/pip | |
~/.cache/pypoetry | |
key: ${{ runner.os }}-pip-${{ matrix.python-version }}-${{ hashFiles('python/pyproject.toml', 'python/requirements-dev.txt') }} | |
restore-keys: | | |
${{ runner.os }}-pip- | |
- name: Install dependencies | |
run: | | |
python -m venv ~/.venv/ci-venv | |
source ~/.venv/ci-venv/bin/activate | |
python -m pip install --upgrade pip | |
pip install -r python/requirements-dev.txt | |
make develop | |
- name: Linting with ruff | |
run: | | |
source ~/.venv/ci-venv/bin/activate | |
cd python && ruff $(git ls-files '*.py') | |
- name: Static analysis with mypy | |
run: | | |
source ~/.venv/ci-venv/bin/activate | |
mypy --version | |
mypy --config-file python/mypy.ini $(git ls-files '*.py') | |
- name: Tests | |
run: | | |
source ~/.venv/ci-venv/bin/activate | |
cd python && pytest |