[prs] Distance-based PRS with corrected betas #1431
Workflow file for this run
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name: conda-build | |
on: [pull_request] | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ["3.11"] | |
steps: | |
- name: Checkout code | |
uses: actions/checkout@v3 | |
- name: Build Miniconda | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
auto-activate-base: true | |
activate-environment: true | |
python-version: ${{ matrix.python-version }} | |
- name: Install Bystro using Maturin | |
run: | | |
. .initialize_conda_env.sh | |
make install | |
echo "PATH=$CONDA/bin:$PATH" >> $GITHUB_ENV | |
shell: bash | |
- name: Verify Bystro wheel exists | |
run: | | |
WHEEL_FILE=$(find python/target/wheels -name 'bystro-*-cp311-cp311-manylinux*x86_64.whl' | head -n 1) | |
if [[ -z "$WHEEL_FILE" ]]; then | |
echo "Expected Bystro manylinux x86_64 wheel not found!" | |
exit 1 | |
fi | |
echo "Bystro wheel found! Build succeeded." | |
- name: Verify bystro-api is installed | |
run: | | |
set -e | |
bystro-api --help | |
echo "bystro-api installed successfully" |