Skip to content
@churchill-lab

Churchill's Lab

Gary Churchill's Lab at The Jackson Laboratory

Pinned Loading

  1. g2gtools g2gtools Public

    Personal diploid genome creation and coordinate conversion

    Python 21 9

  2. alntools alntools Public

    Preprocess bam file into a compressed alignment incidence matrix (equivalence class)

    Python 2 1

  3. kallisto-align kallisto-align Public

    Export kallisto pseudo-alignments in a sparse binary matrix format

    C++ 5 2

  4. emase-zero emase-zero Public

    C++ Implementation of EMASE

    C++ 6 2

  5. emase emase Public

    Expectation-Maximization algorithm for Allele-Specific Expression

    Python 21 13

  6. gbrs gbrs Public

    Genotype-free genome reconstruction and ASE quantification

    Python 8 3

Repositories

Showing 10 of 48 repositories
  • g2gtools Public

    Personal diploid genome creation and coordinate conversion

    churchill-lab/g2gtools’s past year of commit activity
    Python 21 9 9 1 Updated Sep 25, 2024
  • gbrs Public

    Genotype-free genome reconstruction and ASE quantification

    churchill-lab/gbrs’s past year of commit activity
    Python 8 MIT 3 2 3 Updated Sep 19, 2024
  • intermediate Public Forked from simecek/intermediate

    small R utility for mediation analysis

    churchill-lab/intermediate’s past year of commit activity
    R 5 13 0 1 Updated Aug 5, 2024
  • qtl2web Public
    churchill-lab/qtl2web’s past year of commit activity
    HTML 0 MIT 0 0 4 Updated May 21, 2024
  • qtl2api Public

    Wrapper around rqtl/qtl2

    churchill-lab/qtl2api’s past year of commit activity
    R 0 0 0 0 Updated Apr 13, 2024
  • qtl2rest Public

    Docker container for qtl2api R library.

    churchill-lab/qtl2rest’s past year of commit activity
    R 0 0 0 0 Updated Apr 13, 2024
  • simplerestrserve Public

    A very simple Docker image for RestRserve

    churchill-lab/simplerestrserve’s past year of commit activity
    R 0 0 0 0 Updated Feb 2, 2024
  • ensimplR Public
    churchill-lab/ensimplR’s past year of commit activity
    R 1 0 0 0 Updated Jan 30, 2024
  • emase Public

    Expectation-Maximization algorithm for Allele-Specific Expression

    churchill-lab/emase’s past year of commit activity
    Python 21 GPL-3.0 13 5 1 Updated May 9, 2023
  • alntools Public

    Preprocess bam file into a compressed alignment incidence matrix (equivalence class)

    churchill-lab/alntools’s past year of commit activity
    Python 2 MIT 1 5 3 Updated Apr 22, 2023

Top languages

Loading…

Most used topics

Loading…