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🔖 release 0.4.9 #105

Merged
merged 15 commits into from
Sep 27, 2023
Merged

🔖 release 0.4.9 #105

merged 15 commits into from
Sep 27, 2023

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bunop
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@bunop bunop commented Sep 12, 2023

Description

  • Load phenotypes for Fosses, Provencale goat breeds
  • Add sex for Fosses, Provencale goat breeds
  • Add sex while importing metadata
  • Load multiple phenotypes for Boutsko foreground sheeps
  • Add multiple phenotypes as a list (✨ add multiple phenotypes to samples #103 )
  • Update datasets metadata
  • Update dependencies

Related Issue

close #103

Motivation and Context

This PR is required to maintain code and fix some issues with metadata and phenotypes

How Has This Been Tested?

This has been tested with CI and by running code and by updating the database metadata

Screenshots (if appropriate):

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Refactoring (non-breaking change which improve code itself)
  • Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

  • My code follows the code style of this project.
  • My change requires a change to the documentation.
  • I have updated the documentation accordingly.
  • I have read the CONTRIBUTING document.
  • I have added tests to cover my changes.
  • All new and existing tests passed.

bunop and others added 10 commits September 4, 2023 15:13
Bumps [pygments](https://github.com/pygments/pygments) from 2.8.0 to 2.15.0.
- [Release notes](https://github.com/pygments/pygments/releases)
- [Changelog](https://github.com/pygments/pygments/blob/master/CHANGES)
- [Commits](pygments/pygments@2.8.0...2.15.0)

---
updated-dependencies:
- dependency-name: pygments
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [certifi](https://github.com/certifi/python-certifi) from 2022.12.7 to 2023.7.22.
- [Commits](certifi/python-certifi@2022.12.07...2023.07.22)

---
updated-dependencies:
- dependency-name: certifi
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [tornado](https://github.com/tornadoweb/tornado) from 6.3.2 to 6.3.3.
- [Changelog](https://github.com/tornadoweb/tornado/blob/master/docs/releases.rst)
- [Commits](tornadoweb/tornado@v6.3.2...v6.3.3)

---
updated-dependencies:
- dependency-name: tornado
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
update jupyter libraries
Adding multiple phenotypes to samples
@bunop bunop added enhancement New feature or request dependencies Pull requests that update a dependency file labels Sep 12, 2023
@bunop bunop added this to the SMARTER database v1.0.0 milestone Sep 12, 2023
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coveralls commented Sep 12, 2023

Coverage Status

coverage: 94.308% (-0.1%) from 94.419% when pulling 37bac05 on devel into b1fca7b on master.

@bunop bunop changed the title 🔖 release 0.4.8.post1 🔖 release 0.4.9 Sep 27, 2023
@bunop bunop merged commit 6739d66 into master Sep 27, 2023
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✨ add multiple phenotypes to samples
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