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24 Open 67 Closed
24 Open 67 Closed
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Issues list

discordant pathology diagnosis and cancer group columns for DIPG samples
#607 opened Aug 26, 2024 by rjcorb
Updated analysis: add file types to pre-release QC
#606 opened Aug 13, 2024 by jharenza
Add CNVkit theta2 seg file to OPC v16
#604 opened Jul 31, 2024 by jharenza
93 tasks
Add HLA typing results to OPC
#603 opened Jul 26, 2024 by jharenza
93 tasks
Updated analysis: fix MB SHH subtyping abridged output file
#599 opened Jul 16, 2024 by rjcorb
@rjcorb
Add unpaired normal BS IDs to OPC v16 histologies
#598 opened Jul 10, 2024 by rjcorb
Update WGS & WXS independent specimens
#597 opened Jul 10, 2024 by rjcorb
5
Pathology review of MB samples with high-conf other subtypes needed pathology review
#593 opened Jul 7, 2024 by jharenza
HOPE tumor_only sub_cohort missing germline_sex_estimate annotation as "Unknown" bug Something isn't working data-release
#592 opened Jul 7, 2024 by jharenza
Updated analysis: add PPTID to PB subtyping enhancement New feature or request ready for review work in progress
#590 opened Jul 2, 2024 by jharenza
@sangeetashukla
Check DIPG cancer groupings bug Something isn't working
#587 opened Jun 26, 2024 by jharenza
Add treatment info to V16 data-release enhancement New feature or request
#586 opened Jun 17, 2024 by migbro
93 tasks
Updated analysis: add exome capture samples to testing data code improvement
#577 opened May 30, 2024 by jharenza
Updated analysis: BS_YZD4SSMA has cancer group DIPG, but DMG subtype bug Something isn't working ready for review work in progress
#566 opened Apr 23, 2024 by jharenza
@sangeetashukla
👯‍♀️ Slightly duplicated RNA_library bug Something isn't working completed v16
#562 opened Mar 27, 2024 by migbro
@jharenza
1
Add biospecimen_site or other field designation for autopsy sample locations enhancement New feature or request
#561 opened Mar 22, 2024 by jharenza
DGD sample duplications in histologies.tsv blocked data-release
#559 opened Mar 9, 2024 by jharenza
1
Duplicates in fusion-annoFuse.tsv.gz file bug Something isn't working
#558 opened Mar 9, 2024 by jharenza
2
cnv-controlfreec-tumor-only.tsv.gz status field capitalized but other CNV files lowercase bug Something isn't working completed v16
#557 opened Mar 9, 2024 by jharenza
2
Updated analysis: Add EGFR as gene of interests in HGG molecular subtyping enhancement New feature or request new feature
#532 opened Jan 2, 2024 by zzgeng
Updated analysis: focal cn module- remove bit putting germline sex from WGS to WXS samples code improvement enhancement New feature or request
#511 opened Dec 29, 2023 by jharenza
1
Updated analysis: create subset files rework code improvement enhancement New feature or request
#486 opened Dec 14, 2023 by jharenza
Updated analysis: Embryonal samples with different methylation subtype and molecular subtype needs investigation
#470 opened Nov 28, 2023 by zzgeng
Create list of cancer group/path dx discrepancies based on high-confidence methyl subtypes needs investigation
#393 opened May 15, 2023 by jharenza
@zzgeng
ProTip! Exclude everything labeled bug with -label:bug.