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@d3b-center

D3b

Center for Data Driven Discovery in Biomedicine at the Children's Hospital of Philadelphia

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  1. bixtools bixtools Public

    🐳 Dockerfiles for bioinformatics tools

    Dockerfile 14 4

  2. d3b-cli-igor d3b-cli-igor Public

    All-purpose CLI tool for D3b Center and partner orgs

    Python

Repositories

Showing 10 of 134 repositories
  • pLGG_imaging_clustering_genomic Public
    d3b-center/pLGG_imaging_clustering_genomic’s past year of commit activity
    HTML 0 Apache-2.0 0 1 1 Updated Jul 17, 2024
  • fw-geojson2image Public

    Flywheel gear to create a labeled image from a QuPath GeoJSON

    d3b-center/fw-geojson2image’s past year of commit activity
    Python 0 0 0 0 Updated Jul 16, 2024
  • peds-brain-auto-skull-strip Public

    Docker for automated skull stripping for pediatric brain tumor subjects

    d3b-center/peds-brain-auto-skull-strip’s past year of commit activity
    Python 0 0 0 0 Updated Jul 16, 2024
  • fw-histomicsTK-tile-wsi Public

    Flywheel gear to extract tiles of a whole slide image (HistomicsTK/large_image)

    d3b-center/fw-histomicsTK-tile-wsi’s past year of commit activity
    Python 0 0 0 0 Updated Jul 16, 2024
  • canine-dev Public

    Canine WF development

    d3b-center/canine-dev’s past year of commit activity
    Common Workflow Language 0 0 0 0 Updated Jul 15, 2024
  • hope-cohort-analysis Public

    Analysis for HOPE cohort

    d3b-center/hope-cohort-analysis’s past year of commit activity
    HTML 3 1 4 12 Updated Jul 13, 2024
  • OpenPedCan-manuscript Public

    The manuscript repository for the Pediatric Open Targets Project

    d3b-center/OpenPedCan-manuscript’s past year of commit activity
    HTML 1 3 0 0 Updated Jul 12, 2024
  • d3b-dff-cli Public

    the command line tool code base for d3b data file foundation

    d3b-center/d3b-dff-cli’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Jul 11, 2024
  • OpenPedCan-analysis Public Forked from AlexsLemonade/OpenPBTA-analysis

    The analysis repository for the Open Pediatric Cancer Project

    d3b-center/OpenPedCan-analysis’s past year of commit activity
    HTML 15 68 21 2 Updated Jul 10, 2024
  • fw-histomicsTK-feature-extraction Public

    Flywheel gear for generating pathomic features

    d3b-center/fw-histomicsTK-feature-extraction’s past year of commit activity
    Python 0 0 0 0 Updated Jul 6, 2024
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