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discordant pathology diagnosis and cancer group columns for DIPG samples #607

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rjcorb opened this issue Aug 26, 2024 · 0 comments
Open

discordant pathology diagnosis and cancer group columns for DIPG samples #607

rjcorb opened this issue Aug 26, 2024 · 0 comments
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rjcorb commented Aug 26, 2024 •
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The following sample IDs in OPC hist v15 have pathology_diagnosis == "Brainstem glioma- Diffuse intrinsic pontine glioma" but cancer_group == "High-grade glioma"

# A tibble: 18 × 3
   sample_id        pathology_diagnosis                                cancer_group     
   <chr>            <chr>                                              <chr>            
 1 7316-4994        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
 2 7316-9435        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
 3 7316-5227        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
 4 7316-3220        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
 5 7316-3232        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
 6 A14565           Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
 7 7316-8017        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
 8 7316-4998        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
 9 C4116933-Tumor   Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
10 7316-3214-A07083 Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
11 A09410           Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
12 7316-3237        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
13 7316-9074        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
14 7316-3214-A07082 Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
15 7316-4447        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
16 C4110660-Tumor   Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
17 7316-7666        Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
18 A07082           Brainstem glioma- Diffuse intrinsic pontine glioma High-grade glioma
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