Monthly Docker Build Validation #16

Run time

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Job	Run time
Get Changed Dockerfiles Matrix	2s
Build BIC-seq2/0.7.2	51s
Build FusionAnnotator/0.1.1	58s
Build FusionCatcher/latest	1m 48s
Build LOH/1.0.1	8m 36s
Build LOH/1.0.0	6m 2s
Build LinkedSV/latest	55s
Build PureCN	1m 37s
Build SVTyper/0.7.1	1m 51s
Build THetA2/0.7.0	1m 27s
Build THetA2/0.7.1	1m 49s
Build VEP/r93_v2	3m 29s
Build VEP/r98	4m 24s
Build VEP/r94	4m 32s
Build VEP/r93	1m 41s
Build VEP/r93.7	4m 26s
Build VarDictJava/1.7.0	1m 11s
Build VarDictJava/1.5.8	1m 25s
Build VarDictJava/fp_filter	49s
Build WGSA	4m 0s
Build add-strelka2-fields/1.0.0	2m 41s
Build annoFuse/0.92.0	10m 30s
Build annoFuse/0.90.0	33s
Build annoFuse/0.91.0	10m 51s
Build annotsv/3.1.1	2m 51s
Build annovar/latest	19s
Build arriba/1.0.1	3m 7s
Build arriba/latest	3m 15s
Build arriba/2.2.1	1m 6s
Build arriba/1.1.0	3m 25s
Build autopvs1/v1.0.1	45s
Build autopvs1/v2.0.0	2m 51s
Build bcbio/variation_recall-0.2.4	56s
Build bcftools/1.20	2m 33s
Build bed_tools/bedopsv2.4.36_plus_bedtools	28s
Build bvcftools	42s
Build bwa/0.7.17-r1188	24s
Build bwa/latest	21s
Build bwa/0.7.15-r1140	27s
Build bwa-bundle/0.1.17	1m 21s
Build bwa-picard/broad	33s
Build bwa-picard/latest	34s
Build bwa-samtools	1m 34s
Build canvas/1.11.0	1m 49s
Build cellranger/5.0	1m 51s
Build cellranger/6.0	2m 16s
Build cellranger/3.1	1m 59s
Build cellranger/6.1.2	50s
Build cnvnator/v0.4.1	2m 3s
Build codex2/3.8	9m 3s
Build consensus-merge/1.0.0	6m 7s
Build consensus-merge/1.1.0	7m 13s
Build controlfreec/11.5	41s
Build cutadapt/latest	38s
Build cutadapt/3.4	1m 12s
Build cutesv/1.0.13	54s
Build cutesv/2.0.3	2m 21s
Build echtvar/0.2.0-rc	12m 25s
Build echtvar/0.1.9	20s
Build echtvar/0.2.0	23s
Build fastqc/v0.11.9	1m 42s
Build freebayes/v1.3.1	25s
Build freebayes/v1.3.2	20s
Build gatk/3.8	1m 56s
Build gatk/4.1.7.0R	4m 5s
Build gatk/4.0.5.2	46s
Build gatk/3.8_ubuntu	1m 35s
Build gatk/4.beta.1	2m 6s
Build gatk/3.5-0-g36282e4	1m 56s
Build gatk/4.1.1.0	2m 6s
Build gatk/4.0.1.0	17s
Build gatk/4.beta.5	2m 7s
Build gatk/3.6-0-g89b7209	8s
Build gatk/latest	18s
Build gatk/4.beta.1-3.5	2m 11s
Build gatk/4.beta.5-tabix	37s
Build gatk/4.beta.6-tabix	22s
Build gatk/4.beta.6	24s
Build gatk/4.2.0.0R	1m 37s
Build gatk/4.0.1.2	19s
Build gatk/4.0.12.0	1m 4s
Build gatk-picard/4.0.1.2-2.8.3	18s
Build gatk-picard/4.beta.1-2.8.3	19s
Build gistic	1m 31s
Build hisat2/2.2.1	23s
Build hotspots/0.1.0	47s
Build intervar/v2.2.1	30s
Build isoseq/v4.0.0	36s
Build kf_vcf2maf/v1.0.3	2m 43s
Build kf_vcf2maf/v1.0.0	12s
Build kf_vcf2maf/v1.0.1	2m 43s
Build kf_vcf2maf/v1.0.2	2m 41s
Build lancet/1.0.7	2m 52s
Build lancet/1.1.x	2m 23s
Build lima/v2.9.0	26s
Build loompy/2.0.16	33s
Build lumpy-sv/0.2.13	1m 23s
Build lumpy-sv/0.3.0	3m 27s
Build manta/1.4	31s
Build manta/1.6.0	26s
Build mend_qc	54s
Build minimap2/v2.28	37s
Build msisensor/1.1.a	1m 15s
Build nanocount/v1.1.0	5m 7s
Build ngscheckmate/1.3	2m 1s
Build octopus/0.6.3-beta	32m 47s
Build pbfusion/v0.4.1	23s
Build pbta-splicing/0.1	10m 13s
Build peddy/v0.4.2	3m 29s
Build peddy/v0.4.7	1m 8s
Build phlat/1.0.0	2m 53s
Build picard/2.18.9R	1m 31s
Build picard/2.8.3	18s
Build picard/2.17.4	20s
Build picard/latest	18s
Build picard/2.15.0	10s
Build picard/2.14.0	11s
Build picard/2.18.9	1m 38s
Build picard-r/picard2.15.0-r.3.3.3	22s
Build picard-r/picard2.8.3-r3.3.3	16s
Build pigeon/v1.2.0	20s
Build pizzly/latest	57s
Build plink/1.90b7.2	20s
Build pypy/3	11m 15s
Build pyspark/3.1.2	2m 4s
Build python/2.7.13	15s
Build python/3.9-canine-util	1m 4s
Build sambamba/0.6.3	1m 56s
Build sambamba/0.7.1	29s
Build samtools/1.9	1m 44s
Build samtools/latest	51s
Build samtools/1.15.1	2m 49s
Build samtools/1.7-11-g041220d	1m 33s
Build samtools/1.6	57s
Build samtools/1.3.1	48s
Build samtools/1.20-parallel	27s
Build sanger/caveman-pindel/latest	4m 53s
Build scRNA_qc/v1.1.0	12m 42s
Build scRNA_qc/v1.0.0	22m 32s
Build scRNA_qc/v1.0.1	3m 2s
Build scdblfinder/1.8.0	1m 40s
Build scdblfinder/v1.12.0	11m 40s
Build scrublet/0.2.3	2m 29s
Build sentieon/202112.01_hifi	3m 22s
Build seqkit/2.3.1	32s
Build sequenza/3.0.0	28s
Build seurat/latest	39s
Build smoove/0.2.5	2m 3s
Build sniffles/2.0.7	31s
Build sniffles/2.0.3	1m 19s
Build snpEff	36s
Build snpEff/4.3t	51s
Build soupx_R/1.6.2	10m 10s
Build soupx_R/4.1.0_SoupX	28m 46s
Build speedseq/latest	30s
Build star/2.7.10b	20s
Build star/fusion-1.5.0	2m 51s
Build star/2.6.1d	17s
Build star/2.7.5a	22s
Build star/fusion-1.10.1	14m 7s
Build star/2.7.11a	27s
Build star/2.7.10a	22s
Build stranded/1.0.0	58s
Build stranded/1.1.0	1m 6s
Build strelka/v2.9.10	1m 6s
Build supremo/1.0.0	6m 9s
Build sv2/latest	1m 56s
Build svaba/1.1.0	3m 28s
Build t1k/v1.0.5	1m 44s
Build t1k/v1.0.2	55s
Build tidyverse/3.6.1-canine-util	38s
Build toolkit_immune_deconvolution/1.0.0	23m 48s
Build toolkit_subtyping/subtyping_v2.0	34m 42s
Build toolkit_subtyping/pyreader0.4.4	33m 30s
Build toolkit_subtyping/4.1.0R	33m 31s
Build toolkit_subtyping/subtyping_v1.0	34m 5s
Build toolkit_subtyping/subtyping_v1.1	35m 8s
Build toolkit_tmb/1.0.0	2m 16s
Build tumor-only-benchmarking/1.0.0	5m 57s
Build vcf_utils	33s
Build velocyto/0.17.17	5m 48s
Build verifybamid/1.0.1	2m 51s
Build verifybamid/latest	2m 50s
Build verifybamid/1.0.2	2m 39s
Build zumis/2.9.4	3m 0s
	11h 6m 59s

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Monthly Docker Build Validation #16

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Monthly Docker Build Validation #16

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