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Update develop-ref after #2202 #2205
Commits on Jul 27, 2022
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log error and increment error count if required lat/lon bound variabl…
…es are not set instad of calling sys.exit
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Update the Release Guide while creating the MET-11.0.0-beta2 developm…
…ent release. Automatic Zenodo updates for each MET release have been DISABLED since they were being created for each development release. Revise the MET instructions to manually update the MET version on Zenodo only for official releases, not development or bugfix releases.
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Merge pull request #1722 from dtcenter/feature_1402_config_cleanup_mo…
…del_app Feature #1402 config cleanup model applications
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Merge pull request #1727 from dtcenter/feature_1726_V5.0.0-beta2
Feature 1726 v5.0.0 beta2
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Commits on Aug 4, 2022
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Feature 1746 recreate release (#1751)
* Adding instructions for recreating and existing release * Reorder the step's based on suggestions from @georgemccabe
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Commits on Aug 26, 2022
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* Modifications for METbaseimage * Update README.md Co-authored-by: johnhg <johnhg@ucar.edu>
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Commits on Aug 30, 2022
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Per dtcenter/METplus-Internal#20, change log output to always include…
… username and include user ID if it is available
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Commits on Sep 1, 2022
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Per dtcenter/METplus-Internal#20, fixed bug introduced from commit 45…
…8714c to develop where error is thrown if username cannot be obtained, which occurs in environment running GHA tests
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Revert "Per dtcenter/METplus-Internal#20, fixed bug introduced from c…
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Revert "Per dtcenter/METplus-Internal#20, change log output to always…
… include username and include user ID if it is available" This reverts commit 458714c.
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Commits on Sep 6, 2022
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Feature dtcenter/METplus-Internal#15 checksum for release (#1769)
Co-authored-by: Julie Prestopnik <jpresto@ucar.edu>
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Feature dtcenter/METplus-Internal#32 change SCRUB_STAGING_DIR default…
… and add documentation (#1784)
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Commits on Sep 9, 2022
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Revert "update Python version to 3.8.6"
This reverts commit c1e6cbc.
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Commits on Sep 12, 2022
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added return value checking to error and exit a non-zero value if doc…
…ker build or docker push fail
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Commits on Sep 19, 2022
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Feature #1330 MJO ENSO use case (#1794)
Co-authored-by: cristianastan2 <cstan@gmu.edu>
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Commits on Sep 21, 2022
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Feature #1816 ensemble vx removal from EnsembleStat (#1820)
Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
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Feature #1816 rename cases and files (#1823)
Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
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Feature #1817 5.0.0-beta3 release (#1825)
Co-authored-by: bikegeek <minnawin@ucar.edu>
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Commits on Sep 27, 2022
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Commits on Oct 3, 2022
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explicitly set units for obs read via python embedding since PR dtcen…
…ter/MET#2288 no longer guesses units based on grib table units (which can be inaccurate of the actual data)
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Merge pull request #1839 from dtcenter/feature_1808_POE_temp_useCase
Feature 1808 poe temp use case
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* Per #1847, moved release notes to be its own chapter, reformatted component release notes, and added new section for upgrade instructions * Per #1847, added release-notes internal tag * Per #1847, fix error and reformat link * Per #1847, modified release instructions to add a section about upgrade instructions * Per #1847, modified release instructions to add a section about upgrade instructions * Per #1847, resolve doc warnings * Per #1847, updated instructions for clarity. * Per #1847, modified text and link. * Per #1847, modified wording and resolve error with note
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Commits on Oct 25, 2022
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Feature 1852 use case physics tendency (#1881)
* Issue #1852 initial work for the Planview plot * Issue #1852 planview plot for physics tendency * issue #1852 cleared away unused/unneccessary code * Issue #1852 update script command * Issue #1852 first draft, doesn't have correct content * Issue #1852 updated name of output plot to include short_range in name * Issue #1852 renamed to include fcstOnly label * Issue #1852 initial commit * Issue #1852 * Issue #1852 * Issue #1852 initial commit * issue #1852 vertical cross section * Issue 1852 clean up unused lines * Issue #1852 initial commit * Issue #1852 * Issue #1852 updates * Issue #1852 fixed documentation warnings, but some problems remain * fixing line length for chapter and section headers and one letter capitalization * cleaning up line spacing and trying to fix a critical error. * trying to fix critical error again * Issue #1852 more description for data and dependency on METplotpy with additional instructions * Issue #1852 update location of input data to single directory * Removing duplicate files with a misformatted name that are not needed * Per #1852, making changes to formatting to eliminate errors * Issue #1852 remove redundant yaml config file * Issue #1852 update PYTHONPATH information * Issue #1852 fixed conflicts * Issue #1852 update path to shapefile * Issue #1852 fixed copy and paste error * Issue #1852 add three use case entries: Planview, VerticalProfile, and VerticalCrossSection for the short range Physics tendency use case * Issue #1852 add latest short range tests to top, move down list when everything passes * Update use_case_groups.json move short_range use cases #10-12 to below the short range test for #9 * Issue #1852 clean up conf files by providing variables for the input netCDF files and for the planview plot, allow user to indicate pressure levels * Issue #1852 Indicate external Python packages * Issue #1852 added external dependency section * removed env vars that don't need to be set -- METPLOTPY_BASE is set by the automated test conf (.github/parm/test_settings.conf) and PYTHONPATH doesn't need to be set because METplotpy is installed in Python environment for use case tests * Update UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview.py Fixed one typo * Update UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection.py Fixed a typo * Update UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile.py Same typo, same fix * Issue #1852 remove extraneous entry for USER_SCRIPT_COMMAND, a hold-over from the original implementation which doesn't allow the user to easily specify the FV3 history file and grid spec netCDF file * Update UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile.conf Removed the incorrect USER_SCRIPT_COMMAND in previous commit. Reinstated the correct version and removed the incorrect command. * update html file from Planview to VerticalProfile Co-authored-by: Lisa Goodrich <lisag@ucar.edu> Co-authored-by: Julie Prestopnik <jpresto@seneca.rap.ucar.edu> Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com> Co-authored-by: Hank Fisher <fisherh@ucar.edu>
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Commits on Oct 26, 2022
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Merge pull request #1908 from dtcenter/feature_1482_useCase_buoyData
Feature 1482 use case buoy data
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Merge pull request #1914 from dtcenter/feature_1828_useCase_cocorahs
Feature 1828 use case cocorahs
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Revert "handle if input to format_thresh is already a list"
This reverts commit d329275.
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per #1910, added time util function to add field info to time info di…
…ctionary and updated wrapper logic to use this function to add this info instead of passing field info (var_info) to CommandBuilder.find_data to get level info, ci-run-all-diff
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change logic to preserve full level string for [fcst/obs]_level so Se…
…riesAnalysis cases build the same file names, but parse out time info for setting generic level for string sub to preserve previous behavior
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Commits on Nov 7, 2022
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add quotes around input files to plot_point_obs command to allow supp…
…ort for Python Embedding as input
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per #1910, added unit tests to ensure that level is set properly in t…
…he forecast input template
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Commits on Nov 10, 2022
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added script to create geovista conda environment via Docker to use i…
…n the automated use case tests
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Commits on Nov 11, 2022
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Feature 1561 use case ugrid python embedding (#1927)
Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
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Feature 1453 use case iodav2 python embedding (#1930)
Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
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Merge pull request #1919 from dtcenter/bugfix_1910_develop_ensemble_s…
…tat_lev_in_fcst Bugfix #1910 develop EnsembleStat level in forecast input template
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Commits on Nov 14, 2022
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Commits on Nov 16, 2022
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Feature #1819 alert users if updates to EnsembleStat use cases are ne…
…eded (#1945) Co-authored-by: Dan Adriaansen <dadriaan@ucar.edu>
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Feature #1953 seeps config in GridStat and PointStat (#1954)
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Feature #1885 gh_projects (#1973)
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Update formatting of the GitHub project filters so that they can be c…
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Feature #1711, #1783, #1814, and #1835 Documentation - Multiple files…
…, PCPCombine constant init, Docker instructions, and MET links (#1967) Co-authored-by: Dan Adriaansen <dadriaan@ucar.edu>
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run diff logic on push for develop and main_v* branches, fix logic to…
… properly run all use cases
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Removed statsmodels from the table, this package is no longer a requirement. The necessary functionality was pulled out of the statsmodels repository and incorporated into the METcalcpy repository
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METdataio *must* only use pandas 1.2.3. METdataio also requires pyyaml.
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METdatio uses pytest to test aspects of the METreformat module
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Explicitly add the step to commit and push changes to the file containing the author list.
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Added METdataio for lxml, numpy, pandas, and pymysql
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Update finalize_release_on_github_official.rst
added branch protection rules step and the interface to Github was modified, you need to click on the stacked '->' icon to switch default branches
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psutil no longer needed in METplotpy and METcalcpy
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METcalcpy no longer requires imutils and allow versions 0.5.3 and above
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Feature 1819 format doc (#1981)
Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
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allow rest of workflow to run even if job to update data volumes fail…
…s in case server is down
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updated version for action to update input data volumes and added max…
… number of DockerHub tag pages to search to 15
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updated release notes for official METplus release to untar the sampl…
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Update release guide to create the input test data directory for offi…
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install library needed for geovista package, remove editable flag so …
…geovista code will be added directly to python instead of reading it from the source code location, ci-skip-all
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fixed bug to set environment variables in the RegridDataPlane environ…
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Feature #2015 modulefiles (#2024)
* Adding modulefile for WCOSS2 * Updated references of 4.1.1 to 5.0.0
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Feature #2005 updates to create v5.1 conda environments that use debi…
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add use case group name to output path so that output and error logs …
…will contain use case category to more easily see which case was run
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per #2006, fix priority of obs_window config variables so that wrappe…
…r-specific version is preferred over generic OBS_WINDOW_BEGIN/END (#2062)
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Feature 2065 v5.1.0 beta1 (#2066)
* updated version number * added release notes * Update docs/Users_Guide/release-notes.rst Co-authored-by: John Halley Gotway <johnhg@ucar.edu> --------- Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
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added commented process list that was accidentally removed -- this is…
… used if the pre-processing steps are needed
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Feature 2076 release dropdown menu (#2083)
* test dropdowns * Update release-notes.rst Attempting to resolve WARNING * testing dropdowns * adding dropdown menus * testing dropdown remove from warning section * dropdown testing * dropdown menu tests * dropdown menus after the warnings section, the dropdown menu only has one space instead of the normal 2 spaces. If it has 2 spaces, it gets sucked into the warning section. * spaces with warning * no spaces for warning * Update release-notes.rst warning note has to be indented 1 space. Originally it was no spaces but then all of the dropdown menus end up in the warning message. If it's 2 spaces, as is normal, then the warning is indented, which is unnecessary. 1 space is slightly indented and keeps the dropdown menus separate. --------- Co-authored-by: jprestop <jpresto@ucar.edu>
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Bugfix #2096/#2098 develop - fix skip if output exists and do not err…
…or if no commands were run (#2099)
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Feature 1516 use case mvmode (#2094)
Co-authored-by: Tracy Hertneky <hertneky@seneca.rap.ucar.edu> Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
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Fix for Dockerfile smell DL4000 (#2112)
Co-authored-by: Giovanni Rosa <giovanni.rosa@unimol.it>
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Feature #1977 ARGO use case (#2148)
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Feature develop cycle change (#2150)
* change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT * Added paths to ignore --------- Co-authored-by: jprestop <jpresto@ucar.edu>
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upgrade python to 3.10 for documentation builds to fix failured intro…
…duced by urllib3 (see urllib3/urllib3#2168)
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update workflow to update input test data to use branch from pull dow…
…n or enter branch by hand if branch does not exist in dtcenter/METplus repo, e.g. if updating data for a PR coming from a fork
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changed order of workflow event triggering info to more easily see th…
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fix docker compose install and call -- needed due to new Alpine Linux…
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Feature 1978 update pyreq doc (#2177)
* Updating for 5.1.0 * Adding greater than or equal to signs
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Feature 2106 release support (#2182)
* Added a paragraph for Release Support Policy * Added a sentence about contacting the team through the METplus GitHub Discussions Forum.
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Per #2159, modify instructions to reflect that we only want a coordin…
…ated release for the official releases and updates to the coordinated release section for the bugfix releases. (#2183)
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Feature 2147 workflow doc (#2185)
* Add new images for github workflow * Added PR section * Modified the Find the GitHub Issue to be Find or Create a GitHub issue * Trying out image keyword compared with figure keyword * Trying out various widths * Added new figures * Reverting to figures from images after modifying figures * Adding the old images which are better quality * Trying out new indention * Working on formatting again * Reducing image widths * Update docs/Contributors_Guide/github_workflow.rst Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com> * Update docs/Contributors_Guide/github_workflow.rst Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com> * Update docs/Contributors_Guide/github_workflow.rst Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com> * Update github_workflow.rst --------- Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
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Feature 2011 tci from cesm fluxnet2015 netcdf (#2192)
Co-authored-by: Mrinal Biswas <biswas@seneca.rap.ucar.edu> Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
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updated script to use metplotpy as base and install pygrib because co…
…nda was failing trying to install matplotlib in Docker for some strange reason
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Feature 2188 use case panda c (#2202)
* added first use case, need to finish docs and add to list * added documentation files, 3 new cases * added 5th use case, docs * final use case, corrected paths for output * Update GridStat_fcstGFS_obsERA5_lowAndTotalCloudFrac.py * removed chars, added space to last section
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