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Update develop-ref after retry #2347 and dtcenter/MET#2683 #2353

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merged 875 commits into from
Sep 19, 2023
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Commits on Oct 25, 2022

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Commits on Oct 28, 2022

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Commits on Nov 1, 2022

  1. updated paths, documentation

    j-opatz committed Nov 1, 2022
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Commits on Nov 3, 2022

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  3. added picture

    j-opatz committed Nov 3, 2022
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Commits on Nov 4, 2022

  1. Correct spelling mistake

    j-opatz authored Nov 4, 2022
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  2. Merge pull request #1908 from dtcenter/feature_1482_useCase_buoyData

    Feature 1482 use case buoy data
    hankenstein2 authored Nov 4, 2022
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  3. Merge pull request #1914 from dtcenter/feature_1828_useCase_cocorahs

    Feature 1828 use case cocorahs
    hankenstein2 authored Nov 4, 2022
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  7. per #1910, added time util function to add field info to time info di…

    …ctionary and updated wrapper logic to use this function to add this info instead of passing field info (var_info) to CommandBuilder.find_data to get level info, ci-run-all-diff
    georgemccabe committed Nov 4, 2022
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  8. change logic to preserve full level string for [fcst/obs]_level so Se…

    …riesAnalysis cases build the same file names, but parse out time info for setting generic level for string sub to preserve previous behavior
    georgemccabe committed Nov 4, 2022
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Commits on Nov 7, 2022

  1. removed commented code

    georgemccabe committed Nov 7, 2022
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  3. add quotes around input files to plot_point_obs command to allow supp…

    …ort for Python Embedding as input
    georgemccabe committed Nov 7, 2022
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  6. remove commented code

    georgemccabe committed Nov 7, 2022
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  7. per #1910, added unit tests to ensure that level is set properly in t…

    …he forecast input template
    georgemccabe committed Nov 7, 2022
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Commits on Nov 10, 2022

  1. added script to create geovista conda environment via Docker to use i…

    …n the automated use case tests
    georgemccabe committed Nov 10, 2022
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Commits on Nov 11, 2022

  1. Feature 1561 use case ugrid python embedding (#1927)

    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    willmayfield and georgemccabe authored Nov 11, 2022
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  2. Feature 1453 use case iodav2 python embedding (#1930)

    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    willmayfield and georgemccabe authored Nov 11, 2022
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  4. Merge pull request #1919 from dtcenter/bugfix_1910_develop_ensemble_s…

    …tat_lev_in_fcst
    
    Bugfix #1910 develop EnsembleStat level in forecast input template
    hankenstein2 authored Nov 11, 2022
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Commits on Nov 14, 2022

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Commits on Nov 15, 2022

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Commits on Nov 16, 2022

  1. Feature #1819 alert users if updates to EnsembleStat use cases are ne…

    …eded (#1945)
    
    Co-authored-by: Dan Adriaansen <dadriaan@ucar.edu>
    georgemccabe and DanielAdriaansen authored Nov 16, 2022
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  3. Feature #1898 tc new options (#1932)

    close undefined
    georgemccabe authored Nov 16, 2022
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Commits on Nov 17, 2022

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  2. Feature #1953 seeps config in GridStat and PointStat (#1954)

    Co-authored-by: johnhg <johnhg@ucar.edu>
    georgemccabe and JohnHalleyGotway authored Nov 17, 2022
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  5. Update VERSION

    georgemccabe authored Nov 17, 2022
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Commits on Nov 18, 2022

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Commits on Nov 21, 2022

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Commits on Dec 1, 2022

  1. Feature #1885 gh_projects (#1973)

    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    JohnHalleyGotway and georgemccabe authored Dec 1, 2022
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Commits on Dec 2, 2022

  1. Update formatting of the GitHub project filters so that they can be c…

    …opy/pasted directly from RTD into the GitHub project filter.
    JohnHalleyGotway committed Dec 2, 2022
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Commits on Dec 5, 2022

  1. Feature #1711, #1783, #1814, and #1835 Documentation - Multiple files…

    …, PCPCombine constant init, Docker instructions, and MET links (#1967)
    
    Co-authored-by: Dan Adriaansen <dadriaan@ucar.edu>
    georgemccabe and DanielAdriaansen authored Dec 5, 2022
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  2. run diff logic on push for develop and main_v* branches, fix logic to…

    … properly run all use cases
    georgemccabe committed Dec 5, 2022
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Commits on Dec 6, 2022

  1. fixed name of external

    georgemccabe committed Dec 6, 2022
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Commits on Dec 7, 2022

  1. Update overview.rst

    Removed statsmodels from the table, this package is no longer a requirement.  The necessary functionality was pulled out of the statsmodels repository and incorporated into the METcalcpy repository
    bikegeek authored Dec 7, 2022
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  2. Update overview.rst

    METdataio *must* only use pandas 1.2.3.  METdataio also requires pyyaml.
    bikegeek authored Dec 7, 2022
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  3. Update overview.rst

    METdatio uses pytest to test aspects of the METreformat module
    bikegeek authored Dec 7, 2022
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  4. Update rotate_authorship.rst

    Explicitly add the step to commit and push changes to the file containing the author list.
    bikegeek authored Dec 7, 2022
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  5. Update overview.rst

    Added METdataio for lxml, numpy, pandas, and pymysql
    bikegeek authored Dec 7, 2022
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Commits on Dec 8, 2022

  1. Update finalize_release_on_github_official.rst

    added branch protection rules step and the interface to Github was modified, you need to click on the stacked '->' icon to switch default branches
    bikegeek authored Dec 8, 2022
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  3. Update overview.rst

    included METdataio for python 3.8.6+ requirement
    bikegeek authored Dec 8, 2022
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  4. Update overview.rst

    psutil no longer needed in METplotpy and METcalcpy
    bikegeek authored Dec 8, 2022
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  5. Update overview.rst

    METcalcpy no longer requires imutils and allow versions 0.5.3 and above
    bikegeek authored Dec 8, 2022
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  6. Update overview.rst

    cleaned up formatting for imutils
    bikegeek authored Dec 8, 2022
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Commits on Dec 9, 2022

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  3. Feature 1819 format doc (#1981)

    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    lisagoodrich and georgemccabe authored Dec 9, 2022
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  6. Feature #1986 v5.0.0 release (#1987)

    Closes #1986
    georgemccabe authored Dec 9, 2022
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Commits on Dec 10, 2022

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Commits on Dec 13, 2022

  1. allow rest of workflow to run even if job to update data volumes fail…

    …s in case server is down
    georgemccabe committed Dec 13, 2022
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  2. updated version for action to update input data volumes and added max…

    … number of DockerHub tag pages to search to 15
    georgemccabe committed Dec 13, 2022
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  3. updated release notes for official METplus release to untar the sampl…

    …e data for next version directory
    georgemccabe committed Dec 13, 2022
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Commits on Dec 15, 2022

  1. install library needed for geovista package, remove editable flag so …

    …geovista code will be added directly to python instead of reading it from the source code location, ci-skip-all
    georgemccabe committed Dec 15, 2022
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Commits on Dec 19, 2022

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Commits on Jan 5, 2023

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Commits on Jan 19, 2023

  1. fixed bug to set environment variables in the RegridDataPlane environ…

    …ment instead of the PyEmbedIngest environment
    georgemccabe committed Jan 19, 2023
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Commits on Jan 25, 2023

  1. Feature #2015 modulefiles (#2024)

    * Adding modulefile for WCOSS2
    
    * Updated references of 4.1.1 to 5.0.0
    jprestop authored Jan 25, 2023
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Commits on Feb 9, 2023

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Commits on Feb 14, 2023

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Commits on Feb 16, 2023

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  3. add use case group name to output path so that output and error logs …

    …will contain use case category to more easily see which case was run
    georgemccabe committed Feb 16, 2023
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Commits on Feb 17, 2023

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  4. add token to checkout

    georgemccabe committed Feb 17, 2023
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Commits on Feb 21, 2023

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Commits on Feb 23, 2023

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  2. Updated color for bold label

    jprestop committed Feb 23, 2023
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Commits on Feb 27, 2023

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Commits on Feb 28, 2023

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  2. per #2006, fix priority of obs_window config variables so that wrappe…

    …r-specific version is preferred over generic OBS_WINDOW_BEGIN/END (#2062)
    georgemccabe authored Feb 28, 2023
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  3. Feature 2065 v5.1.0 beta1 (#2066)

    * updated version number
    
    * added release notes
    
    * Update docs/Users_Guide/release-notes.rst
    
    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    
    ---------
    
    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    j-opatz and JohnHalleyGotway authored Feb 28, 2023
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  4. updated version with -dev

    j-opatz committed Feb 28, 2023
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Commits on Mar 1, 2023

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Commits on Mar 8, 2023

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  3. fixed tab vs spaces

    georgemccabe committed Mar 8, 2023
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Commits on Mar 10, 2023

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Commits on Mar 14, 2023

  1. added commented process list that was accidentally removed -- this is…

    … used if the pre-processing steps are needed
    georgemccabe committed Mar 14, 2023
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Commits on Mar 16, 2023

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  2. Feature 2076 release dropdown menu (#2083)

    * test dropdowns
    
    * Update release-notes.rst
    
    Attempting to resolve WARNING
    
    * testing dropdowns
    
    * adding dropdown menus
    
    * testing dropdown
    
    remove from warning section
    
    * dropdown testing
    
    * dropdown menu tests
    
    * dropdown menus
    
    after the warnings section, the dropdown menu only has one space instead of the normal 2 spaces.  If it has 2 spaces, it gets sucked into the warning section.
    
    * spaces with warning
    
    * no spaces for warning
    
    * Update release-notes.rst
    
    warning note has to be indented 1 space.  Originally it was no spaces but then all of the dropdown menus end up in the warning message.  If it's 2 spaces, as is normal, then the warning is indented, which is unnecessary.  1 space is slightly indented and keeps the dropdown menus separate.
    
    ---------
    
    Co-authored-by: jprestop <jpresto@ucar.edu>
    lisagoodrich and jprestop authored Mar 16, 2023
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Commits on Apr 4, 2023

  1. Bugfix #2096/#2098 develop - fix skip if output exists and do not err…

    …or if no commands were run (#2099)
    georgemccabe authored Apr 4, 2023
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Commits on Apr 6, 2023

  1. Feature 1516 use case mvmode (#2094)

    Co-authored-by: Tracy Hertneky <hertneky@seneca.rap.ucar.edu>
    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    3 people authored Apr 6, 2023
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Commits on Apr 10, 2023

  1. Fix for Dockerfile smell DL4000 (#2112)

    Co-authored-by: Giovanni Rosa <giovanni.rosa@unimol.it>
    2 people authored and georgemccabe committed Apr 10, 2023
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Commits on Apr 25, 2023

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Commits on Apr 26, 2023

  1. Bugfix #2082 develop regrid.convert/censor_thresh/censor_val (#2140)

    fix #2082 main_v5.0 regrid.convert/censor_thresh/censor_val (#2101)
    georgemccabe authored Apr 26, 2023
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Commits on Apr 28, 2023

  1. Feature #1977 ARGO use case (#2148)

    Co-authored-by: j-opatz <59586397+j-opatz@users.noreply.github.com>
    georgemccabe and j-opatz authored Apr 28, 2023
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  2. Feature develop cycle change (#2150)

    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * Added paths to ignore
    
    ---------
    
    Co-authored-by: jprestop <jpresto@ucar.edu>
    lisagoodrich and jprestop authored Apr 28, 2023
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Commits on May 3, 2023

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  3. update workflow to update input test data to use branch from pull dow…

    …n or enter branch by hand if branch does not exist in dtcenter/METplus repo, e.g. if updating data for a PR coming from a fork
    georgemccabe committed May 3, 2023
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Commits on May 5, 2023

  1. changed order of workflow event triggering info to more easily see th…

    …e repository and commit sha that triggered the workflow
    georgemccabe committed May 5, 2023
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Commits on May 11, 2023

  1. fix docker compose install and call -- needed due to new Alpine Linux…

    … release 3.18.0 that does not include docker-compose in the apk repository
    georgemccabe committed May 11, 2023
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Commits on May 17, 2023

  1. Feature 1978 update pyreq doc (#2177)

    * Updating for 5.1.0
    
    * Adding greater than or equal to signs
    jprestop authored May 17, 2023
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Commits on May 22, 2023

  1. Feature 2106 release support (#2182)

    * Added a paragraph for Release Support Policy
    
    * Added a sentence about contacting the team through the METplus GitHub Discussions Forum.
    jprestop authored May 22, 2023
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  3. Per #2159, modify instructions to reflect that we only want a coordin…

    …ated release for the official releases and updates to the coordinated release section for the bugfix releases. (#2183)
    jprestop authored May 22, 2023
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Commits on May 24, 2023

  1. Feature 2147 workflow doc (#2185)

    * Add new images for github workflow
    
    * Added PR section
    
    * Modified the Find the GitHub Issue to be Find or Create a GitHub issue
    
    * Trying out image keyword compared with figure keyword
    
    * Trying out various widths
    
    * Added new figures
    
    * Reverting to figures from images after modifying figures
    
    * Adding the old images which are better quality
    
    * Trying out new indention
    
    * Working on formatting again
    
    * Reducing image widths
    
    * Update docs/Contributors_Guide/github_workflow.rst
    
    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    
    * Update docs/Contributors_Guide/github_workflow.rst
    
    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    
    * Update docs/Contributors_Guide/github_workflow.rst
    
    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    
    * Update github_workflow.rst
    
    ---------
    
    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    jprestop and georgemccabe authored May 24, 2023
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Commits on May 25, 2023

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Commits on Jun 5, 2023

  1. Feature 2011 tci from cesm fluxnet2015 netcdf (#2192)

    Co-authored-by: Mrinal Biswas <biswas@seneca.rap.ucar.edu>
    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    3 people authored Jun 5, 2023
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Commits on Jun 6, 2023

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  4. added to release notes

    georgemccabe committed Jun 6, 2023
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  10. updated script to use metplotpy as base and install pygrib because co…

    …nda was failing trying to install matplotlib in Docker for some strange reason
    georgemccabe committed Jun 6, 2023
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Commits on Jun 7, 2023

  1. Feature 2188 use case panda c (#2202)

    * added first use case, need to finish docs and add to list
    
    * added documentation files, 3 new cases
    
    * added 5th use case, docs
    
    * final use case, corrected paths for output
    
    * Update GridStat_fcstGFS_obsERA5_lowAndTotalCloudFrac.py
    
    * removed chars, added space to last section
    j-opatz authored Jun 7, 2023
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Commits on Jun 12, 2023

  1. turn off 5/6 new air quality and comp use cases because they are caus…

    …ing the disk to fill up in the automated tests and only 1 is needed to test the new behavior. Reordered use case groups to be alphabetical
    georgemccabe committed Jun 12, 2023
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Commits on Jun 13, 2023

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Commits on Jun 28, 2023

  1. added change from NCEP produtil that was somehow not included in the …

    …changes pulled from their repo before starting SonarQube work
    georgemccabe committed Jun 28, 2023
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Commits on Jun 29, 2023

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Commits on Jul 6, 2023

  1. Feature #2188 move PANDA-C cases to clouds category and fix automated…

    … tests (#2237)
    
    Co-authored-by: j-opatz <jopatz@ucar.edu>
    georgemccabe and j-opatz authored Jul 6, 2023
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  2. Feature 2198 use case amdar pbl (#2206)

    Co-authored-by: Daniel Adriaansen <dadriaan@ucar.edu>
    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    3 people authored Jul 6, 2023
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Commits on Jul 10, 2023

  1. Feature #2230 MvMODE usecase doc updates (#2239)

    This updates the use-case documentation to go along with the multivariate MODE enhancements.
    hertneky authored Jul 10, 2023
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Commits on Jul 11, 2023

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Commits on Jul 12, 2023

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Commits on Jul 17, 2023

  1. per #2245, add METplusConfig class function that is called when objec…

    …t is deleted to close log handlers. This prevents OSError: [Errno 24] Too many open files from running all pytests
    georgemccabe committed Jul 17, 2023
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Commits on Jul 18, 2023

  1. Feature #1626 TCDiag updates to wrapper and basic use case (#2248)

    Co-authored-by: Jonathan Vigh <jvigh@ucar.edu>
    georgemccabe and jvigh authored Jul 18, 2023
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Commits on Jul 19, 2023

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  2. add 2 more keywords for use cases that occasionally flag small, unnot…

    …iceable diffs in png images
    georgemccabe committed Jul 19, 2023
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  3. Feature #2253 update tests for diff_util (#2256)

    Co-authored-by: root <root@localhost>
    John-Sharples and root authored Jul 19, 2023
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Commits on Jul 24, 2023

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Commits on Jul 25, 2023

  1. fixed typo

    georgemccabe committed Jul 25, 2023
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  2. fixed another typo

    georgemccabe committed Jul 25, 2023
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  3. Feature #2207 Documentation - Updates to Contributor's Guide (#2263)

    Co-authored-by: Dan Adriaansen <dadriaan@ucar.edu>
    georgemccabe and DanielAdriaansen authored Jul 25, 2023
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  4. Feature develop update install files (#2266)

    * Updating installation files
    
    * Removing run_commands.sh
    
    * Updated the file to add a MINICONDA_PATH
    
    * Adding files for jet
    
    * Adding orion file
    
    * Removing beta references
    
    * Corrected met version
    
    * Adding files for WCOSS2 machines
    
    * Removing rc1 from acorn file
    
    * Removing beta1
    jprestop authored Jul 25, 2023
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Commits on Jul 26, 2023

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Commits on Aug 3, 2023

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Commits on Aug 4, 2023

  1. Use updated dtcenter/metplus-action-data-update tag that fixes bug th…

    …at causes GHA disk to exceed capacity when too many data volumes are created. Use specific commit of coveralls python action to ensure it will not change
    georgemccabe committed Aug 4, 2023
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Commits on Aug 7, 2023

  1. removed climatology keyword from use cases that aren't relevant that …

    …were accidentally added with PR #1984
    georgemccabe committed Aug 7, 2023
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  3. Feature #2282 coord_release_docs (#2288)

    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    JohnHalleyGotway and georgemccabe authored Aug 7, 2023
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Commits on Aug 8, 2023

  1. continue workflow if coveralls step fails -- this typically happens o…

    …n a pull request from a fork because the authentication fails
    georgemccabe committed Aug 8, 2023
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Commits on Aug 9, 2023

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Commits on Aug 21, 2023

  1. Add 'component: repository maintenance' label. Already ran the script…

    … to push this change and the NOAA OAR reporting label to all the METplus repos.
    JohnHalleyGotway committed Aug 21, 2023
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Commits on Aug 22, 2023

  1. Hotfix for labels, adding a new one for 'component: input data' and a…

    …lso fixing the get_lablels.sh to search for up to 200 existing labels. Also work on the log messages.
    JohnHalleyGotway committed Aug 22, 2023
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  2. Fix typo in comment

    JohnHalleyGotway committed Aug 22, 2023
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Commits on Aug 30, 2023

  1. Feature #2283 time looping consolidation (#2311)

    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    georgemccabe and JohnHalleyGotway authored Aug 30, 2023
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  3. New issue template: Update Truth (#2332)

    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    georgemccabe and JohnHalleyGotway authored Aug 30, 2023
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Commits on Sep 5, 2023

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Commits on Sep 13, 2023

  1. Feature #2338 Debian 12 Conda environments (#2341)

    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    georgemccabe and JohnHalleyGotway authored Sep 13, 2023
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  3. Feature 1488 usecase satwinds (#2324)

    Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
    j-opatz and georgemccabe authored Sep 13, 2023
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Commits on Sep 14, 2023

  1. Feature #2283 include times (#2345)

    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    georgemccabe and JohnHalleyGotway authored Sep 14, 2023
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Commits on Sep 15, 2023

  1. Feature #2299 / #2310 Remove deprecated MET config env vars and TCMPR…

    …Plotter (#2347)
    
    Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
    georgemccabe and JohnHalleyGotway authored Sep 15, 2023
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