build: Transition from Java EE to Jakarta EE (#80)

* Upgrade swagger-ui-3.51.2

* Upgrade tomcat 10.0.10

* changed only imports

* changed imports in service loader

* changed swagger jaxrs deployment

* Changed swagger annotations + basic imports

* Changed imports and minimal key length for jsonwebtoken

* Restassured API changes + imports

* Removed trailing slash from CHE_HOME

* Migrate to jakarta schema in web.xml

* Disable tracing

* New artifacts and maven build upgrade

* Removed jackson-jaxrs-json-provider from wsmaster war

* Fixed KeycloakServletModuleTest and forked TracingFilter

* Removed unused dependecies

assembly/assembly-che-tomcat8/pom.xml → assembly/assembly-che-tomcat/pom.xml

@@ -19,11 +19,11 @@
         <groupId>org.eclipse.che</groupId>
         <version>7.37.0-SNAPSHOT</version>
     </parent>
-    <artifactId>assembly-che-tomcat8</artifactId>
+    <artifactId>assembly-che-tomcat</artifactId>
     <packaging>jar</packaging>
-    <name>Che Assembly :: Assemblies Che Tomcat8</name>
+    <name>Che Assembly :: Assemblies Che Tomcat</name>
     <build>
-        <finalName>assembly-che-tomcat8</finalName>
+        <finalName>assembly-che-tomcat</finalName>
         <plugins>
             <plugin>
                 <groupId>org.apache.maven.plugins</groupId>

assembly/assembly-che-tomcat8/src/assembly/conf/server.xml → assembly/assembly-che-tomcat/src/assembly/conf/server.xml

@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='utf-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
 <!--
   Licensed to the Apache Software Foundation (ASF) under one or more
   contributor license agreements.  See the NOTICE file distributed with
@@ -32,7 +32,6 @@
   <Listener className="org.apache.catalina.mbeans.GlobalResourcesLifecycleListener" />
   <Listener className="org.apache.catalina.core.ThreadLocalLeakPreventionListener" />
 
-
   <!-- Global JNDI resources
        Documentation at /docs/jndi-resources-howto.html
   -->
@@ -63,18 +62,17 @@
 
     <!-- A "Connector" represents an endpoint by which requests are received
          and responses are returned. Documentation at :
-         Java HTTP Connector: /docs/config/http.html (blocking & non-blocking)
-         Java AJP  Connector: /docs/config/ajp.html
-         APR (HTTP/AJP) Connector: /docs/apr.html
+         HTTP Connector: /docs/config/http.html
+         AJP  Connector: /docs/config/ajp.html
          Define a non-SSL/TLS HTTP/1.1 Connector on port 8080
     -->
-      <Connector port="${port.http}" protocol="org.apache.coyote.http11.Http11NioProtocol"
+      <Connector port="${port.http:-8080}" protocol="HTTP/1.1"
                  connectionTimeout="20000"
                  maxThreads="300"
                  compression="on"
                  compressionMinSize="2048"
                  noCompressionUserAgents=".*MSIE 6.*"
-                 compressableMimeType="text/html,text/xml,text/plain,text/css,text/javascript,application/json,application/javascript"
+                 compressibleMimeType="text/html,text/xml,text/plain,text/css,text/javascript,application/json,application/javascript"
                  redirectPort="8443"/>
     <!-- A "Connector" using the shared thread pool-->
     <!--
@@ -83,20 +81,32 @@
                connectionTimeout="20000"
                redirectPort="8443" />
     -->
-    <!-- Define a SSL/TLS HTTP/1.1 Connector on port 8443
-         This connector uses the NIO implementation that requires the JSSE
-         style configuration. When using the APR/native implementation, the
-         OpenSSL style configuration is required as described in the APR/native
-         documentation -->
+    <!-- Define an SSL/TLS HTTP/1.1 Connector on port 8443 with HTTP/2
+         This connector uses the NIO implementation. The default
+         SSLImplementation will depend on the presence of the APR/native
+         library and the useOpenSSL attribute of the
+         AprLifecycleListener.
+         Either JSSE or OpenSSL style configuration may be used regardless of
+         the SSLImplementation selected. JSSE style configuration is used below.
+    -->
     <!--
     <Connector port="8443" protocol="org.apache.coyote.http11.Http11NioProtocol"
-               maxThreads="150" SSLEnabled="true" scheme="https" secure="true"
-               clientAuth="false" sslProtocol="TLS" />
+               maxThreads="150" SSLEnabled="true">
+        <UpgradeProtocol className="org.apache.coyote.http2.Http2Protocol" />
+        <SSLHostConfig>
+            <Certificate certificateKeystoreFile="conf/localhost-rsa.jks"
+                         type="RSA" />
+        </SSLHostConfig>
+    </Connector>
     -->
 
     <!-- Define an AJP 1.3 Connector on port 8009 -->
-    <!--Connector port="8009" protocol="AJP/1.3" redirectPort="8443" /-->
-
+    <!--
+    <Connector protocol="AJP/1.3"
+               address="::1"
+               port="8009"
+               redirectPort="8443" />
+    -->
 
     <!-- An Engine represents the entry point (within Catalina) that processes
          every request.  The Engine implementation for Tomcat stand alone
@@ -135,6 +145,13 @@
         <!--
         <Valve className="org.apache.catalina.authenticator.SingleSignOn" />
         -->
+
+        <!-- Access log processes all example.
+             Documentation at: /docs/config/valve.html
+             Note: The pattern used is equivalent to using pattern="common" -->
+        <Valve className="org.apache.catalina.valves.AccessLogValve" directory="logs"
+               prefix="localhost_access_log" suffix=".txt"
+               pattern="%h %l %u %t &quot;%r&quot; %s %b" />
          <Valve className="org.apache.catalina.valves.RemoteIpValve" protocolHeader="X-Forwarded-Proto"
                  internalProxies="\d{1,3}\.\d{1,3}\.\d{1,3}\.\d{1,3}"/>
 

assembly/assembly-main/pom.xml

@@ -25,7 +25,7 @@
     <dependencies>
         <dependency>
             <groupId>org.eclipse.che</groupId>
-            <artifactId>assembly-che-tomcat8</artifactId>
+            <artifactId>assembly-che-tomcat</artifactId>
             <type>zip</type>
         </dependency>
         <dependency>
@@ -86,10 +86,10 @@
                             <artifactItems>
                                 <artifactItem>
                                     <groupId>org.eclipse.che</groupId>
-                                    <artifactId>assembly-che-tomcat8</artifactId>
+                                    <artifactId>assembly-che-tomcat</artifactId>
                                     <type>zip</type>
                                     <overWrite>true</overWrite>
-                                    <outputDirectory>${project.build.directory}/dependency/assembly-che-tomcat8</outputDirectory>
+                                    <outputDirectory>${project.build.directory}/dependency/assembly-che-tomcat</outputDirectory>
                                 </artifactItem>
                             </artifactItems>
                         </configuration>

assembly/assembly-main/src/assembly/assembly.xml

@@ -58,7 +58,7 @@
     </dependencySets>
     <fileSets>
         <fileSet>
-            <directory>${project.build.directory}/dependency/assembly-che-tomcat8</directory>
+            <directory>${project.build.directory}/dependency/assembly-che-tomcat</directory>
             <outputDirectory>tomcat/</outputDirectory>
             <excludes>
                 <exclude>bin/*.bat</exclude>

assembly/assembly-root-war/pom.xml

@@ -32,12 +32,8 @@
             <artifactId>logback-classic</artifactId>
         </dependency>
         <dependency>
-            <groupId>com.google.inject.extensions</groupId>
-            <artifactId>guice-servlet</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>javax.inject</groupId>
-            <artifactId>javax.inject</artifactId>
+            <groupId>jakarta.inject</groupId>
+            <artifactId>jakarta.inject-api</artifactId>
         </dependency>
         <dependency>
             <groupId>net.logstash.logback</groupId>
@@ -62,20 +58,19 @@
             </exclusions>
         </dependency>
         <dependency>
-            <groupId>javax.servlet</groupId>
-            <artifactId>javax.servlet-api</artifactId>
+            <groupId>org.everrest</groupId>
+            <artifactId>everrest-guice-servlet</artifactId>
+        </dependency>
+        <dependency>
+            <groupId>jakarta.servlet</groupId>
+            <artifactId>jakarta.servlet-api</artifactId>
             <scope>provided</scope>
         </dependency>
         <dependency>
             <groupId>org.eclipse.che.core</groupId>
             <artifactId>che-core-api-core</artifactId>
             <scope>test</scope>
         </dependency>
-        <dependency>
-            <groupId>org.hamcrest</groupId>
-            <artifactId>hamcrest-core</artifactId>
-            <scope>test</scope>
-        </dependency>
         <dependency>
             <groupId>org.mockito</groupId>
             <artifactId>mockito-core</artifactId>

assembly/assembly-root-war/src/main/java/org/eclipse/che/ApiAccessRejectionFilter.java

@@ -11,15 +11,15 @@
  */
 package org.eclipse.che;
 
+import jakarta.servlet.Filter;
+import jakarta.servlet.FilterChain;
+import jakarta.servlet.FilterConfig;
+import jakarta.servlet.ServletException;
+import jakarta.servlet.ServletRequest;
+import jakarta.servlet.ServletResponse;
+import jakarta.servlet.http.HttpServletResponse;
 import java.io.IOException;
 import javax.inject.Singleton;
-import javax.servlet.Filter;
-import javax.servlet.FilterChain;
-import javax.servlet.FilterConfig;
-import javax.servlet.ServletException;
-import javax.servlet.ServletRequest;
-import javax.servlet.ServletResponse;
-import javax.servlet.http.HttpServletResponse;
 
 /**
  * Returns internal server error when request is supposed to be handled by API war. Situation occurs

assembly/assembly-root-war/src/main/java/org/eclipse/che/DashboardRedirectionFilter.java

@@ -11,17 +11,17 @@
  */
 package org.eclipse.che;
 
+import jakarta.servlet.Filter;
+import jakarta.servlet.FilterChain;
+import jakarta.servlet.FilterConfig;
+import jakarta.servlet.ServletException;
+import jakarta.servlet.ServletRequest;
+import jakarta.servlet.ServletResponse;
+import jakarta.servlet.http.HttpServletRequest;
+import jakarta.servlet.http.HttpServletResponse;
 import java.io.IOException;
 import java.util.regex.Pattern;
 import javax.inject.Singleton;
-import javax.servlet.Filter;
-import javax.servlet.FilterChain;
-import javax.servlet.FilterConfig;
-import javax.servlet.ServletException;
-import javax.servlet.ServletRequest;
-import javax.servlet.ServletResponse;
-import javax.servlet.http.HttpServletRequest;
-import javax.servlet.http.HttpServletResponse;
 
 /**
  * Redirect user to dashboard if request wasn't made to namespace/workspaceName or app resources.

assembly/assembly-root-war/src/main/webapp/WEB-INF/web.xml

@@ -12,10 +12,11 @@
       Red Hat, Inc. - initial API and implementation
 
 -->
-<web-app xmlns="http://java.sun.com/xml/ns/javaee"
+<web-app xmlns="https://jakarta.ee/xml/ns/jakartaee"
          xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-         xsi:schemaLocation="http://java.sun.com/xml/ns/javaee http://java.sun.com/xml/ns/javaee/web-app_3_0.xsd"
-         version="3.0">
+         xsi:schemaLocation="https://jakarta.ee/xml/ns/jakartaee
+                  https://jakarta.ee/xml/ns/jakartaee/web-app_5_0.xsd"
+         version="5.0">
 
     <listener>
         <listener-class>org.eclipse.che.inject.CheBootstrap</listener-class>

assembly/assembly-root-war/src/test/java/org/eclipse/che/ApiAccessRejectionFilterTest.java

@@ -16,10 +16,10 @@
 import static org.mockito.Mockito.verifyNoMoreInteractions;
 import static org.mockito.Mockito.when;
 
-import javax.servlet.FilterChain;
-import javax.servlet.ServletOutputStream;
-import javax.servlet.http.HttpServletRequest;
-import javax.servlet.http.HttpServletResponse;
+import jakarta.servlet.FilterChain;
+import jakarta.servlet.ServletOutputStream;
+import jakarta.servlet.http.HttpServletRequest;
+import jakarta.servlet.http.HttpServletResponse;
 import org.mockito.InjectMocks;
 import org.mockito.Mock;
 import org.mockito.testng.MockitoTestNGListener;

assembly/assembly-root-war/src/test/java/org/eclipse/che/DashboardRedirectionFilterTest.java

@@ -17,11 +17,11 @@
 import static org.mockito.Mockito.verify;
 import static org.mockito.Mockito.when;
 
-import javax.servlet.FilterChain;
-import javax.servlet.ServletRequest;
-import javax.servlet.ServletResponse;
-import javax.servlet.http.HttpServletRequest;
-import javax.servlet.http.HttpServletResponse;
+import jakarta.servlet.FilterChain;
+import jakarta.servlet.ServletRequest;
+import jakarta.servlet.ServletResponse;
+import jakarta.servlet.http.HttpServletRequest;
+import jakarta.servlet.http.HttpServletResponse;
 import org.eclipse.che.commons.env.EnvironmentContext;
 import org.eclipse.che.commons.subject.SubjectImpl;
 import org.mockito.InjectMocks;