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@epiverse-trace

Epiverse-TRACE

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  1. sivirep sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    R 43 4

  2. epiparameter epiparameter Public

    R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parameters for infectious diseases

    R 33 12

  3. serofoi serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    R 18 4

  4. vaccineff vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    R 16 4

  5. cfr cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    R 13 4

  6. epiCo epiCo Public

    R package for statistical and spatiotemporal modeling of epidemiological data for vector-borne diseases in Colombia

    R 12 1

Repositories

Showing 10 of 60 repositories
  • epi-training-kit Public template

    An e-learning strategy for training on analysis, modelling and response to outbreaks and epidemics in Latin-America and the Caribbean

    epiverse-trace/epi-training-kit’s past year of commit activity
    HTML 7 CC-BY-4.0 1 0 0 Updated Feb 7, 2025
  • epiverse_demos Public
    epiverse-trace/epiverse_demos’s past year of commit activity
    0 MIT 0 0 2 Updated Feb 7, 2025
  • simulist Public

    An R package for simulating line lists

    epiverse-trace/simulist’s past year of commit activity
    R 9 1 9 0 Updated Feb 7, 2025
  • cleanepi Public

    R package to clean and standardize epidemiological data

    epiverse-trace/cleanepi’s past year of commit activity
    R 9 3 12 3 Updated Feb 7, 2025
  • serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    epiverse-trace/serofoi’s past year of commit activity
    R 18 4 19 2 Updated Feb 7, 2025
  • cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    epiverse-trace/cfr’s past year of commit activity
    R 13 4 11 1 Updated Feb 6, 2025
  • epiverse Public

    Meta-package for the Epiverse-TRACE R packages

    epiverse-trace/epiverse’s past year of commit activity
    R 1 0 0 1 Updated Feb 6, 2025
  • ColOpenData Public

    ColOpenData is a package that acquires and wrangles Colombian socioeconomic, geospatial and climate data

    epiverse-trace/ColOpenData’s past year of commit activity
    R 11 1 3 0 Updated Feb 6, 2025
  • sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    epiverse-trace/sivirep’s past year of commit activity
    R 43 4 6 3 Updated Feb 5, 2025
  • safeframe Public

    Tagging, validating, and safeguarding data to help harden data pipelines.

    epiverse-trace/safeframe’s past year of commit activity
    R 0 0 7 3 Updated Feb 5, 2025
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