Fix test and add test-data

galaxyproteomics · Sep 22, 2023 · 6ff3ad4 · 6ff3ad4
1 parent 7fcdbd0
commit 6ff3ad4
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Showing 4 changed files with 9 additions and 2 deletions.
diff --git a/tools/diann/diann.xml b/tools/diann/diann.xml
@@ -446,8 +446,8 @@
                     <has_text text="PrecursorMz"/>
                 </assert_contents>
             </output>
-            <output name="output_report_speclib" file="report-lib.tsv.speclib" compare="sim_size" />
-            <output name="output_report_pred_speclib" file="report-lib.predicted.speclib" compare="sim_size" />
+            <output name="output_report_speclib" file="report-lib.tsv.speclib" compare="sim_size" delta="100"/>
+            <output name="output_report_pred_speclib" file="report-lib.predicted.speclib" compare="sim_size" delta="100"/>
         </test>
         <!-- test for multiple fastas -->
         <test expect_num_outputs="1">

diff --git a/tools/diann/test-data/bsa2.fasta b/tools/diann/test-data/bsa2.fasta
@@ -0,0 +1,7 @@
+>bsa_test sp|P02769|ALBU_BOVIN_TEST Serum albumin OS=Bos taurus OX=9913 GN=ALB PE=1 SV=4
+MKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPF
+DEHVKLVNELTEFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHLVDEPQNLIKQNCDQFEK
+HPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEK
+LGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLIL
+NRLCVLHEKTPVSEKVTDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCA
+STQTALA
diff --git a/tools/diann/test-data/report-lib.predicted.speclib b/tools/diann/test-data/report-lib.predicted.speclib
diff --git a/tools/diann/test-data/report-lib.tsv.speclib b/tools/diann/test-data/report-lib.tsv.speclib