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Update gorules_test_errors.gaf
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Added test for gorule-0000022 ##676
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pgaudet authored May 6, 2024
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Expand Up @@ -140,6 +140,8 @@ MGI:1100518 Smad7 bla involved_in GO:0017015 MGI:MGI:3836072|PMID:18952608 IC GO
UniProtKB O76187 darA enables GO:0004672 PMID:9802899 IDA UniProtKB:P34149 F GORULE_TEST:0000020-4 Darlin darA protein taxon:44689 20100205 GO_Central involved_in(GO:0090503)
! FAILS GORULE:0000020 - TEST 5 - obsolete term in 'extension' (column 16) with a replacement
UniProtKB O76187 darA enables GO:0004672 PMID:9802899 IDA UniProtKB:P34149 F GORULE_TEST:0000020-5 Darlin darA protein taxon:44689 20100205 GO_Central involved_in(GO:0014067)
! FAILS GORULE:0000022 - TEST 1 - retracted paper
UniProtKB O76187 darA involved_in GO:0017015 PMID:37278189 IDA F GORULE_TEST:0000022-1 protein taxon:44689 20230513 GO_Central
! FAILS GORULE:0000027 - TEST 1 - Prefix not in /db-xrefs.yaml
UniPotKB Q9HC96 CAPN10 involved_in GO:0006921 PMID:23072806 IDA P GORULE_TEST:0000027-1 Calpain-10 CAPN10,KIAA1845 protein taxon:9606 20140213 GO_Central
! FAILS GORULE:0000027 - TEST 2 - Assigned_by not in /groups.yaml
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