regenerated, fixed issue with MGI, see geneontology/go-site#617

geneontology · Aug 3, 2018 · 4002053 · 4002053
1 parent 0d2d78b
commit 4002053
Showing 1 changed file with 6 additions and 3 deletions.
diff --git a/minerva-core/src/main/resources/go_context.jsonld b/minerva-core/src/main/resources/go_context.jsonld
@@ -40,7 +40,7 @@
         "InterPro": "http://identifiers.org/interpro/", 
         "UniRule": "http://www.uniprot.org/unirule/", 
         "MGCSC_GENETIC_STOCKS": "http://www.maizegdb.org/cgi-bin/displaystockrecord.cgi?id=", 
-        "dictyBase": "http://identifiers.org/dictybase/", 
+        "dictyBase": "http://identifiers.org/dictybase.gene/", 
         "PO_GIT": "https://github.com/Planteome/plant-ontology/issues/", 
         "AspGD_LOCUS": "http://identifiers.org/aspgd.locus/", 
         "SGD": "http://identifiers.org/sgd/", 
@@ -95,11 +95,13 @@
         "TGD_LOCUS": "http://db.ciliate.org/cgi-bin/locus.pl?locus=", 
         "MA": "http://purl.obolibrary.org/obo/MA_", 
         "UniProtKB": "http://identifiers.org/uniprot/", 
-        "MGI": "http://identifiers.org/mgi/", 
+        "MGI": "http://identifiers.org/mgi/MGI:", 
         "GRINDesc": "https://npgsweb.ars-grin.gov/gringlobal/descriptordetail.aspx?id=", 
         "DDANAT": "http://purl.obolibrary.org/obo/DDANAT_", 
         "RAP-DB": "http://rapdb.dna.affrc.go.jp/tools/search/run?id=on&attr=desc&attr=cgs&attr=cgn&attr=cgss&attr=cgns&attr=rgss&attr=rgns&keyword=", 
+        "gomodel": "http://model.geneontology.org/", 
         "KEGG_PATHWAY": "http://identifiers.org/kegg.pathway/", 
+        "BTO": "http://purl.obolibrary.org/obo/BTO_", 
         "JCVI_CMR": "http://cmr.jcvi.org/cgi-bin/CMR/shared/GenePage.cgi?locus=", 
         "dictyBase_REF": "http://dictybase.org/db/cgi-bin/dictyBase/reference/reference.pl?refNo=", 
         "DOI": "http://dx.doi.org/", 
@@ -145,7 +147,7 @@
         "FMA": "http://purl.obolibrary.org/obo/FMA_", 
         "CDD": "http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=", 
         "PubChem_Compound": "http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?CMD=search&DB=pccompound&term=", 
-        "HGNC_gene": "http://identifiers.org/hgnc.gene/", 
+        "HGNC_gene": "http://www.genenames.org/data/hgnc_data.php?app_sym=", 
         "PharmGKB": "http://www.pharmgkb.org/do/serve?objId=", 
         "VMD": "http://vmd.vbi.vt.edu/cgi-bin/browse/browserDetail_new.cgi?gene_id=", 
         "UniParc": "http://www.uniprot.org/uniparc/", 
@@ -160,6 +162,7 @@
         "MaizeGDB_Locus": "http://identifiers.org/maizegdb.locus/", 
         "MO": "http://mged.sourceforge.net/ontologies/MGEDontology.php#", 
         "PLANA_REF": "http://purl.obolibrary.org/obo/plana/references/", 
+        "ISBN": "https://www.worldcat.org/search?q=bn%3A", 
         "BRENDA": "http://www.brenda-enzymes.info/php/result_flat.php4?ecno=", 
         "ASAP": "https://asap.ahabs.wisc.edu/annotation/php/feature_info.php?FeatureID=", 
         "CAS": "http://identifiers.org/cas/",