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Brandenburg Jean-Tristan edited this page Nov 11, 2022
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wiki is not update, you can find some example on https://github.com/h3abionet/h3agwas-examples
This wiki covers the following topics
- how to install the pipeline
- how to run the pipeline
- what bioinformatics is done
Please use the side-bar to the right.
About h3aGWAS
Getting started
Running pipelines
- Quick Start
- The nextflow config file
- Pipeline options
- The Pipelines
- Affy Calling
- Converting from Illumina Top-Bottom
- PLINK QC pipeline
- Association testing pipeline
- Post-GWAS analysis
Extending pipelines
Getting help