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feat: adds flag --no-gene-coverage-filtering to pandora map, compare and discover #352

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merged 3 commits into from
Dec 13, 2023
Merged

feat: adds flag --no-gene-coverage-filtering to pandora map, compare and discover #352

merged 3 commits into from
Dec 13, 2023

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leoisl
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@leoisl leoisl commented Dec 13, 2023

This PR adds the flag --no-gene-coverage-filtering to pandora map, compare and discover subcommands:

  --no-gene-coverage-filtering
                              Do not filter genes based on their coverage, effectively ignoring params --min-abs-gene-coverage, --min-rel-gene-coverage, --max-rel-gene-coverage and --min-gene-coverage-proportion. This is useful if you are not using read datasets.

@leoisl leoisl changed the base branch from master to dev December 13, 2023 11:24
@leoisl leoisl merged commit 6befbdb into iqbal-lab-org:dev Dec 13, 2023
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@leoisl leoisl deleted the no-gene-cov-filter branch December 13, 2023 14:18
@leoisl leoisl mentioned this pull request Dec 14, 2023
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