Update DaCapo installation instructions

.gitattributes

@@ -0,0 +1 @@
+*.ipynb

examples/distance_task/finetune_liver_peroxisome.ipynb

@@ -21,6 +21,35 @@
     "These are then combined in a single **dacapo.experiments.Run** that includes your starting point (whether you want to start training from scratch or continue off of a previously trained model) and stopping criterion (the number of iterations you want to train)."
    ]
   },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "## Environment setup\n",
+    "If you have not already done so, you will need to install DaCapo. You can do this by first creating a new environment and then installing DaCapo using pip.\n",
+    "\n",
+    "```bash\n",
+    "conda create -n dacapo python=3.10\n",
+    "conda activate dacapo\n",
+    "```\n",
+    "\n",
+    "Then, you can install DaCapo using pip, via GitHub:\n",
+    "\n",
+    "```bash\n",
+    "pip install git+https://github.com/janelia-cellmap/dacapo.git\n",
+    "```\n",
+    "\n",
+    "Or you can clone the repository and install it locally:\n",
+    "\n",
+    "```bash\n",
+    "git clone https://github.com/janelia-cellmap/dacapo.git\n",
+    "cd dacapo\n",
+    "pip install -e .\n",
+    "```\n",
+    "\n",
+    "Be sure to select this environment in your Jupyter notebook or JupyterLab."
+   ]
+  },
   {
    "cell_type": "markdown",
    "metadata": {},
@@ -500,7 +529,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.10.12"
+   "version": "3.10.13"
   },
   "orig_nbformat": 4
  },

setup.py

@@ -41,5 +41,7 @@
         "cattrs",
         "numpy-indexed",
         "click",
+        "ipykernel",
+        "jupyter",
     ],
 )