Format Python code with psf/black push (#106)

There appear to be some python formatting errors in e42012f. This pull request uses the [psf/black](https://github.com/psf/black) formatter to fix these issues.
janelia-cellmap · Feb 15, 2024 · eebe748 · eebe748
2 parents 74e2e39 + 2f65cd6
commit eebe748
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Showing 7 changed files with 11 additions and 11 deletions.
diff --git a/dacapo/apply.py b/dacapo/apply.py
@@ -174,8 +174,8 @@ def apply_run(
     run: Run,
     parameters: PostProcessorParameters,
     input_array: Array,
-    prediction_array_identifier: 'LocalArrayIdentifier',
-    output_array_identifier: 'LocalArrayIdentifier',
+    prediction_array_identifier: "LocalArrayIdentifier",
+    output_array_identifier: "LocalArrayIdentifier",
     roi: Optional[Roi] = None,
     num_cpu_workers: int = 30,
     output_dtype: Optional[np.dtype] = np.uint8,  # type: ignore

diff --git a/dacapo/blockwise/argmax_worker.py b/dacapo/blockwise/argmax_worker.py
@@ -72,8 +72,8 @@ def start_worker(
 
 
 def spawn_worker(
-    input_array_identifier: 'LocalArrayIdentifier',
-    output_array_identifier: 'LocalArrayIdentifier',
+    input_array_identifier: "LocalArrayIdentifier",
+    output_array_identifier: "LocalArrayIdentifier",
     compute_context: ComputeContext = LocalTorch(),
 ):
     """Spawn a worker to predict on a given dataset.

diff --git a/dacapo/blockwise/predict_worker.py b/dacapo/blockwise/predict_worker.py
@@ -170,8 +170,8 @@ def start_worker(
 def spawn_worker(
     run_name: str,
     iteration: int,
-    raw_array_identifier: 'LocalArrayIdentifier',
-    prediction_array_identifier: 'LocalArrayIdentifier',
+    raw_array_identifier: "LocalArrayIdentifier",
+    prediction_array_identifier: "LocalArrayIdentifier",
     compute_context: ComputeContext = LocalTorch(),
 ):
     """Spawn a worker to predict on a given dataset.

diff --git a/dacapo/blockwise/threshold_worker.py b/dacapo/blockwise/threshold_worker.py
@@ -73,8 +73,8 @@ def start_worker(
 
 
 def spawn_worker(
-    input_array_identifier: 'LocalArrayIdentifier',
-    output_array_identifier: 'LocalArrayIdentifier',
+    input_array_identifier: "LocalArrayIdentifier",
+    output_array_identifier: "LocalArrayIdentifier",
     threshold: float = 0.0,
     compute_context: ComputeContext = LocalTorch(),
 ):

diff --git a/dacapo/experiments/tasks/post_processors/watershed_post_processor.py b/dacapo/experiments/tasks/post_processors/watershed_post_processor.py
@@ -35,7 +35,7 @@ def set_prediction(self, prediction_array_identifier):
     def process(
         self,
         parameters: WatershedPostProcessorParameters,
-        output_array_identifier: 'LocalArrayIdentifier',
+        output_array_identifier: "LocalArrayIdentifier",
     ):
         output_array = ZarrArray.create_from_array_identifier(
             output_array_identifier,

diff --git a/dacapo/store/array_store.py b/dacapo/store/array_store.py
@@ -62,7 +62,7 @@ def validation_input_arrays(
         pass
 
     @abstractmethod
-    def remove(self, array_identifier: 'LocalArrayIdentifier') -> None:
+    def remove(self, array_identifier: "LocalArrayIdentifier") -> None:
         """Remove an array by its identifier."""
         pass
 

diff --git a/dacapo/store/local_array_store.py b/dacapo/store/local_array_store.py
@@ -85,7 +85,7 @@ def validation_container(self, run_name: str) -> LocalContainerIdentifier:
             Path(self.__get_run_dir(run_name), "validation.zarr")
         )
 
-    def remove(self, array_identifier: 'LocalArrayIdentifier') -> None:
+    def remove(self, array_identifier: "LocalArrayIdentifier") -> None:
         container = array_identifier.container
         dataset = array_identifier.dataset