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  1. snakemake_unit_tests snakemake_unit_tests Public

    Candidate supplement to snakemake --generate-unit-tests with more compatible use cases and flexibility.

    C++ 1

  2. process.phenotypes process.phenotypes Public

    automated phenotype standardization and reporting

    R

  3. UCI-GREGoR/wgs-calling UCI-GREGoR/wgs-calling Public

    Short read WGS calling for PMGRC/GREGoR

    Python 1 2

  4. UCI-GREGoR/wgs-validation UCI-GREGoR/wgs-validation Public

    Snakemake workflow for validation of variant calls

    Python 1 2

  5. imputed-data-dynamic-threshold imputed-data-dynamic-threshold Public

    Compute imputed variant exclusion lists based on https://doi.org/10.1002%2Fgepi.21603

    C++ 2 1

  6. gwas-winners-curse gwas-winners-curse Public

    tool for probabilistic correction of Winner's Curse in two-stage GWAS

    R 1