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fixing PandaInnereyeSSLMIL #625

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merged 12 commits into from
Jan 11, 2022
Merged

fixing PandaInnereyeSSLMIL #625

merged 12 commits into from
Jan 11, 2022

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vale-salvatelli
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This PR contains:

  • an updated committed to hi-ml where the checkpoint downloader is fixed
  • some updates to PandaDeepMIL to enable the use of a SSL pre-trained checkpoint on PANDA
  • downloading checkpoint for CRCk has been moved to the child class for clarity

@vale-salvatelli vale-salvatelli changed the title WIP: fixing PandaInnereyeSSLMIL fixing PandaInnereyeSSLMIL Jan 11, 2022
dccastro
dccastro previously approved these changes Jan 11, 2022
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InnerEye/Common/fixed_paths.py Outdated Show resolved Hide resolved
InnerEye/ML/Histopathology/models/deepmil.py Outdated Show resolved Hide resolved
InnerEye/ML/configs/histo_configs/classification/DeepSMILECrck.py Show resolved Hide resolved
InnerEye/ML/configs/histo_configs/run_ids.py Show resolved Hide resolved
InnerEye/ML/configs/histo_configs/classification/DeepSMILEPanda.py Outdated Show resolved Hide resolved
@vale-salvatelli vale-salvatelli merged commit 25db288 into main Jan 11, 2022
@vale-salvatelli vale-salvatelli deleted the vsalva/use_panda_checkpoint branch January 11, 2022 17:54
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@dccastro dccastro dccastro approved these changes

@javier-alvarez javier-alvarez javier-alvarez approved these changes

@mebristo mebristo Awaiting requested review from mebristo

@ant0nsc ant0nsc Awaiting requested review from ant0nsc

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@vale-salvatelli @javier-alvarez @ant0nsc @dccastro