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130 Open 319 Closed
130 Open 319 Closed
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Issues list

tombo preprocess annotate_raw_with_fastqs Added sequences to a total of 0 reads.
#458 opened Sep 20, 2024 by AlexL-0408
Which strand to use in RNA modification?
#456 opened May 24, 2024 by guangzhaocs
Support RNA004 kit in Tombo
#455 opened May 16, 2024 by charlesxu90
3
none correlation between modification position and +/- 1
#454 opened Apr 18, 2024 by DelphIONe
2
Problem importing Tombo in python
#453 opened Mar 6, 2024 by MarioRinBarr
1
Fail to Install tombo using venv3 Ubuntu18.04
#452 opened Feb 26, 2024 by abadouh
1
Cannot install on Mac OS
#451 opened Feb 12, 2024 by edimmick
1
overplot-type doesn't work
#450 opened Jan 16, 2024 by uribertocchi
1
Can't install Tombo under current Ubuntu installation
#449 opened Jan 2, 2024 by jsthv
2
issue when running re-squiggle
#448 opened Dec 14, 2023 by tweedle828
2
Endless running Tombo resuiggle, reached to 100% in resuiggle but doesn't finish the job
#447 opened Dec 7, 2023 by kwonej0617
1
[resquiggle] Most of my reads are unsuccessful bc "extends beyond bandwidth"
#446 opened Nov 27, 2023 by skranz0
2
Will this affect my next analysis
#445 opened Nov 21, 2023 by lanyunxin
2
Unsuccessful resquiggle for RNA
#443 opened Oct 30, 2023 by vgori
4
tombo plot error: Encountered invalid genome sequence request
#442 opened Oct 12, 2023 by xiezhq
Slow Re-squiggle though set --process 40 to run tombo resquiggle over multiple cores
#441 opened Oct 7, 2023 by jouhpf
3
Endless running Tombo resuiggle, reached to 100% in resuiggle but doesn't go to next step, generate output files
#437 opened Jul 13, 2023 by kwonej0617
1
tombo installing error by pip
#434 opened Jun 26, 2023 by gaoxiangcao
1
preprocessing for tombo
#429 opened Apr 12, 2023 by priyanagpal25
2
How is expected fraction abundance calculated? Does it normalize for coverage in treated vs untreated conditions?
#428 opened Apr 4, 2023 by smk5g5
Is there a minimum sequence length/ can resquiggle work with a 38 nt reference?
#426 opened Mar 9, 2023 by zaettu
Instalation issue with python 3.9 and last version of conda
#425 opened Mar 8, 2023 by enriiquee
1
ERROR: 'utf-8' codec can't decode byte 0x8b
#424 opened Mar 6, 2023 by sagnikbanerjee15
4
Problems in starting the analysis. Please help me
#423 opened Feb 20, 2023 by Francinepiubeli
1
tombo preprocess annotate_raw_with_fastqs
#422 opened Feb 14, 2023 by AzlanNI
16
ProTip! no:milestone will show everything without a milestone.