Update viridis scale

DESCRIPTION

@@ -1,7 +1,7 @@
 Type: Package
 Package: EpiCompare
 Title: Comparison, Benchmarking & QC of Epigenomic Datasets
-Version: 1.9.6
+Version: 1.9.7
 Authors@R: c(
     person(given = "Sera", family = "Choi", 
         email = "serachoi1230@gmail.com", 

R/plot_chromHMM.R

@@ -102,7 +102,7 @@ plot_chromHMM <- function(peaklist,
                                     fill = value)) +
     ggplot2::ylab("") +
     ggplot2::xlab("") +
-    ggplot2::scale_fill_viridis_b() +
+    ggplot2::scale_fill_viridis_c() +
     ggplot2::theme_minimal() +
     ggplot2::theme(axis.text = ggplot2::element_text(size = 11)) +
     ggplot2::theme(axis.text.x = ggplot2::element_text(angle = 315,

R/tidy_chromosomes.R

@@ -35,7 +35,7 @@
 #' @examples
 #' # make a GRanges
 #' chrom <- c("chr2", "chr3", "chrX", "chrY", "chrM", "junk")
-#' gr <- GRanges(seqnames = chrom,
+#' gr <- GenomicRanges::GRanges(seqnames = chrom,
 #'               ranges = IRanges(start = 2*(1:6), end = 3*(1:6)),
 #'               strand = "+",
 #'               seqinfo = Seqinfo(chrom))

README.md

@@ -9,7 +9,7 @@
 GPL-3](https://img.shields.io/badge/license-GPL--3-blue.svg)](https://cran.r-project.org/web/licenses/GPL-3)
 [![](https://img.shields.io/badge/doi-https://doi.org/10.1101/2022.07.22.501149-blue.svg)](https://doi.org/https://doi.org/10.1101/2022.07.22.501149)
 <br>
-[![](https://img.shields.io/badge/devel%20version-1.9.6-black.svg)](https://github.com/neurogenomics/EpiCompare)
+[![](https://img.shields.io/badge/devel%20version-1.9.7-black.svg)](https://github.com/neurogenomics/EpiCompare)
 [![](https://img.shields.io/github/languages/code-size/neurogenomics/EpiCompare.svg)](https://github.com/neurogenomics/EpiCompare)
 [![](https://img.shields.io/github/last-commit/neurogenomics/EpiCompare.svg)](https://github.com/neurogenomics/EpiCompare/commits/master)
 <br> [![R build