Merge pull request #138 from HDash/remove-deprecated-package · neurogenomics/rworkflows@3e99811

Triggered via push December 18, 2024 14:28

bschilder

master

Status Success

Total duration 10m 30s

Artifacts –

rworkflows_static.yml

on: push

Matrix: rworkflows_static

3 errors and 8 warnings

[@octokit/auth-action] The token variable is specified more than once. Use either `with.token`, `with.GITHUB_TOKEN`, or `env.GITHUB_TOKEN`. See https://github.com/octokit/auth-action.js#createactionauth

No such keg: /opt/homebrew/Cellar/pkg-config@0.29.2

[@octokit/auth-action] The token variable is specified more than once. Use either `with.token`, `with.GITHUB_TOKEN`, or `env.GITHUB_TOKEN`. See https://github.com/octokit/auth-action.js#createactionauth

ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

dependency 'BiocVersion' is not available

pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf

HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!

dependencies ‘BiocVersion’, ‘BiocStyle’ are not available

harfbuzz 10.1.0 is already installed and up-to-date. To reinstall 10.1.0, run: brew reinstall harfbuzz

fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi

macOS's Gatekeeper has been disabled for this Cask