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Fix validation of input when launching from website #813

Merged
merged 2 commits into from
Nov 8, 2022
Merged

Fix validation of input when launching from website #813

merged 2 commits into from
Nov 8, 2022

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FriederikeHanssen
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Close #694

Took a peak at how rnaseq does the input validation and that one works through the website.

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs- [ ] If necessary, also make a PR on the nf-core/sarek branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

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github-actions bot commented Nov 7, 2022 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit d1dfdc8

+| ✅ 151 tests passed       |+
#| ❔   8 tests were ignored |#
!| ❗   1 tests had warnings |!

❗ Test warnings:

  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your prefered methods description, e.g. add publication citation for this pipeline

❔ Tests ignored:

✅ Tests passed:

Run details

  • nf-core/tools version 2.6
  • Run at 2022-11-08 12:27:32

@FriederikeHanssen FriederikeHanssen merged commit bb9e6b4 into nf-core:dev Nov 8, 2022
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@edmundmiller edmundmiller edmundmiller approved these changes

@maxulysse maxulysse Awaiting requested review from maxulysse maxulysse is a code owner

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@FriederikeHanssen @edmundmiller