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Release/0.6.0 #88
Release/0.6.0 #88
Commits on Jul 3, 2022
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Merge remote-tracking branch 'origin/main' into
issues/72_Validator_Generates_False-Positives
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Identifier profile rules now generally removed except for Patient
Code cleanup in ValidateDataLearningTest
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missing concept inclusion now independent of code-system version
Modified the code to only add concepts that are missing based on no other entry with the same system and code existing in the expansion. The previous implementation also compared code-system version resulting in duplicate entries, if the terminology server did not include the version but the definition did or vice versa.
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there won't be a version 0.5.2, 0.6.0 will include fixed false-positive validation errors and additional changes to the process
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Commits on Jul 4, 2022
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added log warning, listing ValueSet not available for validation
For example the following ValueSet are missing from the de.gecco|1.0.5 validation package and its dependencies: * http://hl7.org/fhir/uv/ips/ValueSet/laboratory-tests-and-panels-uv-ips * http://loinc.org/vs/LL738-6 * https://fhir.kbv.de/ValueSet/KBV_VS_MIO_Vaccination_TargetDisease * https://fhir.kbv.de/ValueSet/KBV_VS_SFHIR_ICD_DIAGNOSESICHERHEIT * https://fhir.kbv.de/ValueSet/KBV_VS_SFHIR_ICD_SEITENLOKALISATION
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Commits on Jul 5, 2022
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'origin/issues/72_Validator_Generates_False-Positives' into develop
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added new data logger class and config parameter to enable data logging
Logging off search, result and transfer bundles is now disabled by default and can be enable using the config parameter `de.netzwerk.universitaetsmedizin.codex.gecco.dataLoggingEnabled` Also fixes a small issue with resource IDs not visible in log messages generated by the ReadData class, due to a bad order of operations. Resource IDs are now logged as absolute IDs.
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adds dry-run functionality to data-send process
The data-send process can now be instructed to perform a dry-run only using the optional input-parameter "dry-run" with a value of "true". A dry-run will abort the data-send process after validation end enryption of the transfer bundle but before the bundle is stored in the local DSF FHIR server and a Task to start the data-translate process is send to the GECCO Transfer Hub.
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Commits on Jul 6, 2022
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process version in generated .env file, env var used in docker-compose
Added new process version environment variable to generated .env file. PROCESS_VERSION environment variable now used in process exclude config in docker-compose file.
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Commits on Jul 7, 2022
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Commits on Jul 11, 2022
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excluded all learning tests from executing during build
The pattern **/*LearningTest.java is used to exclude learning tests.
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added bundle size to GTH output, fixed errors not showing up in output
Changes to the Task resource need to be stored in the leading task process variable since it is the only one that survives the return task restarting the process via the intermediate message throw events. The start-data-translate process Task now shows the size (in bytes) of the encrypted transfer bundle.
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Commits on Jul 12, 2022
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