Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Release/0.6.0 #88

Merged
merged 28 commits into from
Jul 12, 2022
Merged

Release/0.6.0 #88

merged 28 commits into from
Jul 12, 2022

Commits on Jul 3, 2022

  1. Merge remote-tracking branch 'origin/main' into

    issues/72_Validator_Generates_False-Positives
    hhund committed Jul 3, 2022
    Configuration menu
    Copy the full SHA
    bb5f9cf View commit details
    Browse the repository at this point in the history
  2. version to 0.5.2-SNAPSHOT

    hhund committed Jul 3, 2022
    Configuration menu
    Copy the full SHA
    19aa267 View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    f27bb7b View commit details
    Browse the repository at this point in the history
  4. Identifier profile rules now generally removed except for Patient

    Code cleanup in ValidateDataLearningTest
    hhund committed Jul 3, 2022
    Configuration menu
    Copy the full SHA
    bc45c30 View commit details
    Browse the repository at this point in the history
  5. missing concept inclusion now independent of code-system version

    Modified the code to only add concepts that are missing based on no
    other entry with the same system and code existing in the expansion. The
    previous implementation also compared code-system version resulting in
    duplicate entries, if the terminology server did not include the version
    but the definition did or vice versa.
    hhund committed Jul 3, 2022
    Configuration menu
    Copy the full SHA
    55d1123 View commit details
    Browse the repository at this point in the history
  6. version to 0.6.0-SNAPSHOT

    there won't be a version 0.5.2, 0.6.0 will include fixed false-positive
    validation errors and additional changes to the process
    hhund committed Jul 3, 2022
    Configuration menu
    Copy the full SHA
    c4f0d08 View commit details
    Browse the repository at this point in the history

Commits on Jul 4, 2022

  1. Configuration menu
    Copy the full SHA
    26e7e8c View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    881fea4 View commit details
    Browse the repository at this point in the history

Commits on Jul 5, 2022

  1. Merge remote-tracking branch

    'origin/issues/72_Validator_Generates_False-Positives' into develop
    hhund committed Jul 5, 2022
    Configuration menu
    Copy the full SHA
    5f8c810 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    ec13ba5 View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    df7e6ef View commit details
    Browse the repository at this point in the history
  4. Configuration menu
    Copy the full SHA
    a4894ca View commit details
    Browse the repository at this point in the history
  5. added new data logger class and config parameter to enable data logging

    Logging off search, result and transfer bundles is now disabled by
    default and can be enable using the config parameter
    `de.netzwerk.universitaetsmedizin.codex.gecco.dataLoggingEnabled`
    
    Also fixes a small issue with resource IDs not visible in log messages
    generated by the ReadData class, due to a bad order of operations.
    Resource IDs are now logged as absolute IDs.
    hhund committed Jul 5, 2022
    Configuration menu
    Copy the full SHA
    d54b07f View commit details
    Browse the repository at this point in the history
  6. adds dry-run functionality to data-send process

    The data-send process can now be instructed to perform a dry-run only
    using the optional input-parameter "dry-run" with a value of "true". A
    dry-run will abort the data-send process after validation end enryption
    of the transfer bundle but before the bundle is stored in the local DSF
    FHIR server and a Task to start the data-translate process is send to
    the GECCO Transfer Hub.
    hhund committed Jul 5, 2022
    Configuration menu
    Copy the full SHA
    cd15c7c View commit details
    Browse the repository at this point in the history

Commits on Jul 6, 2022

  1. Configuration menu
    Copy the full SHA
    28058ac View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    059756a View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    c8d2229 View commit details
    Browse the repository at this point in the history
  4. improved parameter description

    hhund committed Jul 6, 2022
    Configuration menu
    Copy the full SHA
    5a37f79 View commit details
    Browse the repository at this point in the history
  5. process version in generated .env file, env var used in docker-compose

    Added new process version environment variable to generated .env file.
    PROCESS_VERSION environment variable now used in process exclude config
    in docker-compose file.
    hhund committed Jul 6, 2022
    Configuration menu
    Copy the full SHA
    334ff0e View commit details
    Browse the repository at this point in the history

Commits on Jul 7, 2022

  1. Configuration menu
    Copy the full SHA
    0dfbf2a View commit details
    Browse the repository at this point in the history

Commits on Jul 11, 2022

  1. UCUM learning test

    hhund committed Jul 11, 2022
    Configuration menu
    Copy the full SHA
    6aa716b View commit details
    Browse the repository at this point in the history
  2. excluded all learning tests from executing during build

    The pattern **/*LearningTest.java is used to exclude learning tests.
    hhund committed Jul 11, 2022
    Configuration menu
    Copy the full SHA
    f0003e3 View commit details
    Browse the repository at this point in the history
  3. added bundle size to GTH output, fixed errors not showing up in output

    Changes to the Task resource need to be stored in the leading task
    process variable since it is the only one that survives the return task
    restarting the process via the intermediate message throw events.
    
    The start-data-translate process Task now shows the size (in bytes) of
    the encrypted transfer bundle.
    hhund committed Jul 11, 2022
    Configuration menu
    Copy the full SHA
    cb4cc6a View commit details
    Browse the repository at this point in the history
  4. Configuration menu
    Copy the full SHA
    e55a71b View commit details
    Browse the repository at this point in the history

Commits on Jul 12, 2022

  1. Configuration menu
    Copy the full SHA
    7c78c7a View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    12ee872 View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    a5a13dc View commit details
    Browse the repository at this point in the history
  4. 0.6.0 release

    hhund committed Jul 12, 2022
    Configuration menu
    Copy the full SHA
    5b4caa2 View commit details
    Browse the repository at this point in the history