#119 Ported primary auditory cortex test

openworm · Nov 8, 2019 · b9b7913 · b9b7913
1 parent 5cc7b3f
commit b9b7913
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Showing 2 changed files with 103 additions and 3 deletions.
diff --git a/__tests__/ModelFactory.test.js b/__tests__/ModelFactory.test.js
@@ -21,14 +21,113 @@ test('load test model with new instances', () => {
   GEPPETTO.Manager.loadModel(testModel);
 
   expect(ModelFactory.allPaths.length).toBe(11);
+  expect(Instances.length).toBe(7)
+  expect(Instances.a.getValue().l[0]).toBe('x');
+  expect(Instances.b.getValue().expression).toBe('exp');
+  expect(Instances.b.getPosition().y).toBe(50);
+  expect(Instances.c.getValue().x.y.data).toBe('imageData');
+  expect(Instances.d.getValue().a.text).toBe('Test');
+  expect(Instances.d.getValue().b.url).toBe("http://aaa.com");
+  expect(Instances.d.getValue().c.x).toBe(1);
+  expect(Instances.E.getValue().value.length).toBe(3);
+  expect(Instances.getInstance('v.ctv').getValue().value.text).toBe('aaa');
+  expect(Instances.a2b.a).toBe(Instances.a);
+  expect(Instances.a2b.b).toBe(Instances.b);
   ModelFactory.allPaths = [];
+  ModelFactory.allPathsIndexing = [];
 });
 
-test('load demo model 1', () => {
+test('load demo model 1: Hodgkin-Huxley NEURON simulation', () => {
   GEPPETTO.Manager.loadModel(require('./resources/model.1.json'));
   // console.log(ModelFactory.allPaths);
   expect(ModelFactory.allPaths.length).toBe(136);
-
+  Instances.getInstance('time');
+  expect(Instances.length).toBe(2);
+  ModelFactory.allPaths = [];
+  ModelFactory.allPathsIndexing = [];
 
 });
-
+
+test('load demo model 5: Primary auditory cortex network', () => {
+  GEPPETTO.Manager.loadModel(require('./resources/model.5.json'));
+  // console.log(ModelFactory.allPaths);
+
+
+  expect(ModelFactory.allPaths.length).toBe(13491);
+  expect(window.acnet2 != undefined && window.acnet2.baskets_12 != undefined)
+    .toBeTruthy();
+  expect(window.acnet2.pyramidals_48.getChildren().length === 48
+    && window.acnet2.baskets_12.getChildren().length === 12)
+    .toBeTruthy()
+
+
+  expect(GEPPETTO.ModelFactory.resolve('//@libraries.1/@types.5').getId() == window.Model.getLibraries()[1].getTypes()[5].getId()
+    && GEPPETTO.ModelFactory.resolve('//@libraries.1/@types.5').getMetaType() == window.Model.getLibraries()[1].getTypes()[5].getMetaType())
+    .toBeTruthy()
+
+  let acnet2 = window.acnet2;
+  expect(acnet2.baskets_12[0].getTypes().length == 1
+  && acnet2.baskets_12[0].getTypes()[0].getId() == 'bask'
+  && acnet2.baskets_12[0].getTypes()[0].getMetaType() == 'CompositeType')
+    .toBeTruthy()
+
+
+  expect(acnet2.baskets_12[0].getTypes()[0].getVisualType().getVisualGroups().length == 3
+  && acnet2.baskets_12[0].getTypes()[0].getVisualType().getVisualGroups()[0].getId() == 'Cell_Regions'
+  && (acnet2.baskets_12[0].getTypes()[0].getVisualType().getVisualGroups()[1].getId() == 'Kdr_bask'
+      || acnet2.baskets_12[0].getTypes()[0].getVisualType().getVisualGroups()[1].getId() == 'Kdr_bask')
+  && (acnet2.baskets_12[0].getTypes()[0].getVisualType().getVisualGroups()[2].getId() == 'Na_bask'
+      || acnet2.baskets_12[0].getTypes()[0].getVisualType().getVisualGroups()[2].getId() == 'Na_bask'))
+    .toBeTruthy();
+
+  expect(GEPPETTO.ModelFactory.getAllInstancesOf(acnet2.baskets_12[0].getType()).length == 12
+  && GEPPETTO.ModelFactory.getAllInstancesOf(acnet2.baskets_12[0].getType().getPath()).length == 12
+  && GEPPETTO.ModelFactory.getAllInstancesOf(acnet2.baskets_12[0].getType())[0].getId() == "baskets_12[0]"
+  && GEPPETTO.ModelFactory.getAllInstancesOf(acnet2.baskets_12[0].getType())[0].getMetaType() == "ArrayElementInstance")
+    .toBeTruthy()
+
+  expect(GEPPETTO.ModelFactory.getAllInstancesOf(acnet2.baskets_12[0].getVariable()).length == 1
+  && GEPPETTO.ModelFactory.getAllInstancesOf(acnet2.baskets_12[0].getVariable().getPath()).length == 1
+  && GEPPETTO.ModelFactory.getAllInstancesOf(acnet2.baskets_12[0].getVariable())[0].getId() == "baskets_12"
+  && GEPPETTO.ModelFactory.getAllInstancesOf(acnet2.baskets_12[0].getVariable())[0].getMetaType() == "ArrayInstance")
+    .toBeTruthy()
+
+  expect(GEPPETTO.ModelFactory.allPathsIndexing.length ).toBe(9741)
+  expect(GEPPETTO.ModelFactory.allPathsIndexing[0].path ).toBe('acnet2')
+  expect( GEPPETTO.ModelFactory.allPathsIndexing[0].metaType ).toBe( 'CompositeType')
+  expect(GEPPETTO.ModelFactory.allPathsIndexing[9741 - 2].path).toBe( "acnet2.SmallNet_bask_bask.GABA_syn_inh.GABA_syn_inh")
+  expect(GEPPETTO.ModelFactory.allPathsIndexing[9741 - 1].metaType)
+    .toBe('StateVariableType')
+
+  expect(window.Instances.getInstance('acnet2.baskets_12[3]').getInstancePath() == 'acnet2.baskets_12[3]')
+    .toBeTruthy()
+
+
+  expect(window.Instances.getInstance('acnet2.baskets_12[3].soma_0.v').getInstancePath() == 'acnet2.baskets_12[3].soma_0.v')
+    .toBeTruthy()
+
+
+  expect(window.Instances.getInstance('acnet2.baskets_12[3].sticaxxi') == undefined)
+    .toBeTruthy()
+
+
+  expect(window.acnet2.baskets_12[0].hasCapability(GEPPETTO.Resources.VISUAL_CAPABILITY))
+    .toBeTruthy()
+
+
+  expect(window.acnet2.baskets_12[0].getType().hasCapability(GEPPETTO.Resources.VISUAL_CAPABILITY))
+    .toBeTruthy()
+
+
+  expect(window.Model.neuroml.network_ACnet2.temperature.hasCapability(GEPPETTO.Resources.PARAMETER_CAPABILITY))
+    .toBeTruthy()
+
+  expect(GEPPETTO.ModelFactory.getAllVariablesOfMetaType(GEPPETTO.ModelFactory.getAllTypesOfMetaType(GEPPETTO.Resources.COMPOSITE_TYPE_NODE),
+    'ConnectionType')[0].hasCapability(GEPPETTO.Resources.CONNECTION_CAPABILITY))
+    .toBeTruthy()
+
+  expect(window.acnet2.pyramidals_48[0].getConnections()[0].hasCapability(GEPPETTO.Resources.CONNECTION_CAPABILITY))
+    .toBeTruthy()
+  ModelFactory.allPaths = [];
+
+});
diff --git a/__tests__/resources/model.5.json b/__tests__/resources/model.5.json