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@Naturhistoriska The Swedish Museum of Natural History

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    26 repositories

    • samlingar

      Public
      Java
      •0•0•0•1•Updated Dec 17, 2024Dec 17, 2024

    • NRM-DNA-lab

      Public
      Files for the NRM DNA lab
      Perl
      •0•0•0•0•Updated Nov 11, 2024Nov 11, 2024

    • naturarv

      Public
      javadockerdocker-compose
      Java
      •
      MIT License
      •1•0•0•3•Updated Oct 16, 2024Oct 16, 2024

    • morphbank-images-service

      Public
      Java
      •0•0•0•0•Updated Jun 25, 2024Jun 25, 2024

    • NRM-ptemplate

      Public
      ptemplate -- A project template
      Shell
      •1•0•0•0•Updated Mar 27, 2024Mar 27, 2024

    • birdscanner

      Public
      Birdscanner - Extract homologous gene regions from scaffolds using nhmmer
      bashgnu-linuxuppmax
      Perl
      •
      MIT License
      •0•0•1•0•Updated Dec 1, 2023Dec 1, 2023

    • dnakey

      Public
      docker-composedocker
      Java
      •
      MIT License
      •0•0•0•3•Updated Sep 12, 2023Sep 12, 2023

    • Georg

      Public
      Georeferencing tool for natural history collections
      dockerfiledocker-compose
      Java
      •
      MIT License
      •1•3•53•2•Updated Jun 7, 2023Jun 7, 2023

    • NRM-SNV-Mosses-workflow

      Public
      NRM SNV Mosses popgen workflow
      R
      •0•0•0•0•Updated Apr 26, 2023Apr 26, 2023

    • jasperserver

      Public
      A docker'ized' JasperReports Server, pdf-server
      1•0•0•0•Updated Mar 31, 2023Mar 31, 2023

    • swedishbirdrecoveries

      Public
      Package in R for Swedish Bird Recovery data and visuals
      dockerrdocker-composeshinyshinydashboard
      HTML
      •
      GNU Affero General Public License v3.0
      •1•0•8•0•Updated Mar 30, 2023Mar 30, 2023

    • loan-management

      Public
      Java
      •
      MIT License
      •0•0•0•13•Updated Jun 30, 2022Jun 30, 2022

    • BjornBD2021

      Public
      R
      •1•0•0•0•Updated Jun 30, 2022Jun 30, 2022

    • backup2nrm

      Public
      Backup script for transferring UPPMAX files to NRM.
      Perl
      •
      MIT License
      •0•0•0•0•Updated Aug 12, 2021Aug 12, 2021

    • BjornYZ2020

      Public
      R
      •2•0•0•0•Updated Jun 29, 2021Jun 29, 2021

    • BIOinfo-course

      Public
      Literature course in Bioinformatics for Biologists at NRM
      HTML
      •
      GNU General Public License v3.0
      •5•1•0•0•Updated Apr 8, 2021Apr 8, 2021

    • georg-pelias

      Public
      Run the Pelias geocoder in docker containers, including example projects.
      Shell
      •
      MIT License
      •229•0•0•0•Updated Feb 11, 2021Feb 11, 2021

    • NRM-LaTeX-Beamer

      Public
      Simple LaTeX-beamer template for PDF presentations with NRM theme
      TeX
      •
      MIT License
      •0•0•0•0•Updated Dec 18, 2020Dec 18, 2020

    • CSB

      Public
      Material for Computing Skills for Biologists
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •77•0•0•0•Updated Oct 15, 2020Oct 15, 2020

    • BjornAC2019

      Public
      R
      •2•0•0•0•Updated Jun 30, 2020Jun 30, 2020

    • populationstrend

      Public
      a feature, used in 'naturforskaren', link for some birds
      CSS
      •
      GNU Affero General Public License v3.0
      •2•0•0•0•Updated Jun 26, 2020Jun 26, 2020

    • georg-data

      Public
      Processing data for use in the georeferencing tool Georg
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 12, 2020Jun 12, 2020

    • NRM-Linux-Handbook

      Public
      wiki-pages
      2•5•0•0•Updated Dec 2, 2019Dec 2, 2019

    • Toximeter

      Public
      JavaScript
      •0•0•0•0•Updated Nov 7, 2019Nov 7, 2019

    • cardinality.py

      Public
      Examine the cardinality of a relation between two datasets
      pandastsv-formatdata-migration-tool
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 24, 2019Sep 24, 2019

    • extract_mysql_tables.py

      Public
      A simple command-line tool for exporting tables from a MySQL database to TSV-files
      mysqltsv-formatdata-migration-tool
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 2, 2019Sep 2, 2019