Skip to content
@psipred

UCL Bioinformatics Group

UCL bioinformatics group repositories

Popular repositories Loading

  1. protein-vae protein-vae Public

    Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies

    Python 80 17

  2. DMPfold DMPfold Public

    De novo protein structure prediction using iteratively predicted structural constraints

    C 55 16

  3. cgdms cgdms Public

    Differentiable molecular simulation of proteins with a coarse-grained potential

    Python 53 4

  4. psipred psipred Public

    PSIPRED Protein Secondary Structure Predictor

    Java 51 12

  5. DMPfold2 DMPfold2 Public

    Fast and accurate protein structure prediction

    Python 49 12

  6. s4pred s4pred Public

    A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence

    Python 48 9

Repositories

Showing 10 of 46 repositories
  • psipred_react Public

    A react port of the psipred_webserver dynamic pages

    psipred/psipred_react’s past year of commit activity
    JavaScript 1 0 1 0 Updated Nov 22, 2024
  • pGenTHREADER Public

    Protein fold recognition using strucutal and sequence template threading

    psipred/pGenTHREADER’s past year of commit activity
    C 5 2 1 0 Updated Nov 21, 2024
  • disopred Public

    Protein structural disorder prediction

    psipred/disopred’s past year of commit activity
    C++ 17 8 2 0 Updated Nov 21, 2024
  • MemSatSVM Public

    Membrane helix prediction with SVMs

    psipred/MemSatSVM’s past year of commit activity
    Perl 1 2 0 0 Updated Nov 21, 2024
  • psipred Public

    PSIPRED Protein Secondary Structure Predictor

    psipred/psipred’s past year of commit activity
    Java 51 12 0 1 Updated Nov 21, 2024
  • merizo_search Public

    Fast protein domain structure embedding+search tool

    psipred/merizo_search’s past year of commit activity
    Python 8 GPL-3.0 3 0 0 Updated Nov 19, 2024
  • Merizo Public

    Fast and accurate protein domain segmentation using Invariant Point Attention

    psipred/Merizo’s past year of commit activity
    Python 26 GPL-3.0 5 1 0 Updated Oct 30, 2024
  • ted-tools Public

    ML toolset for creating TED: The Encyclopedia of Domains

    psipred/ted-tools’s past year of commit activity
    Python 9 MIT 1 1 0 Updated Aug 27, 2024
  • analytics_automated Public Forked from AnalyticsAutomated/analytics_automated

    Middleware layer for exposing analytics and distributed computing jobs as web services

    psipred/analytics_automated’s past year of commit activity
    Python 0 4 0 0 Updated Aug 18, 2024
  • p53_docking Public

    Project code for Chris Morris collab

    psipred/p53_docking’s past year of commit activity
    Python 0 0 0 0 Updated Jul 26, 2024

Most used topics

Loading…