Superkmer annotation#10

Open

adamant-pwn wants to merge 24 commits intomasterfrom superkmer_annotation

+285-6

Commits on Apr 8, 2024

Commits on Apr 11, 2024

fixed minimizer bug
mmarzett
committed

Commits on Apr 12, 2024

fixed bug in skew index case
mmarzett
committed

Commits on Apr 18, 2024

changes for loss-less annotation: added superkmer mask and return superkmer id with superkmer start index
mmarzett
committed

Commits on Apr 22, 2024

Commits on Apr 24, 2024

Commits on Apr 26, 2024

getting superkmer label batches
mmarzett
committed

Commits on Apr 27, 2024

tiny bug fix
mmarzett
committed

Commits on Apr 28, 2024

paralellized bit vector construction
mmarzett
committed

Commits on Apr 29, 2024

splitting and merging of superkmer vector for parallelization
mmarzett
committed

Commits on May 1, 2024

more efficient query for kmers in non-monochromatic superkmers
mmarzett
committed

Commits on May 3, 2024

Merge branch 'superkmer_annotation_mapping' into superkmer_annotation
mmarzett
committed

Commits on May 7, 2024

reverse complement bug fix
mmarzett
committed

Commits on May 12, 2024

returning kmer index during superkmer lookup
mmarzett
committed

Commits on May 24, 2024

Commits on Jul 25, 2024