Code

Implement VCF bundles.#1703

Code

Merged

cmnbroad merged 10 commits intomastersamtools/htsjdk:masterfrom cn_vcf_bundlessamtools/htsjdk:cn_vcf_bundlesCopy head branch name to clipboardSep 3, 2024

+708-92

Commits

Commits on Aug 19, 2024

• Update bundle content type names.

  cmnbroad

  committed
  a822c58

• Update ReadsBundleTest to use more defined constants.

  cmnbroad

  committed
  48493b2

• Update ReadsBundleTest to use more defined constants.

  cmnbroad

  committed
  86ae11b

• Implement VariantBundles.

  cmnbroad

  committed
  cced91e

• Update based on GATK usage and rebase.

  cmnbroad

  committed
  b01d2e5

• Code review comments part 1 - temp WIP.

  cmnbroad

  committed
  7910a15

• Updates after rebase on new content type strings.

  cmnbroad

  committed
  f29a23a

• More review comments.

  cmnbroad

  committed
  edb4168

• Code review comments.

  cmnbroad

  committed
  e45cd78

Commits on Aug 20, 2024

• Move bundle JSON schema into a nested map.

  cmnbroad

  committed
  3f702cf